RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 NUPL2O15504 423 aaKnown RBP12□□□□□ -0.49
SNIP1-201ENST00000296215 GCNT3O95395 438 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 RARBP10826 455 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 FCGR1AP12314 374 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 TGM2P21980 687 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 BMXP51813 675 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 TBRG1Q3YBR2 411 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 C12orf60Q5U649 245 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 WDR59Q6PJI9 974 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF767PQ75MW2 155 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 DGKHQ86XP1 1220 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 MARVELD2Q8N4S9 558 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 PCYOX1LQ8NBM8 494 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 RDH13Q8NBN7 331 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 SMG7Q92540 1137 aaKnown RBP12□□□□□ -0.49
SNIP1-201ENST00000296215 SENP6Q9GZR1 1112 aaPredicted RBP12□□□□□ -0.49
SNIP1-201ENST00000296215 PRMT8Q9NR22 394 aaPredicted RBP12□□□□□ -0.49
SNIP1-201ENST00000296215 CHD1O14646 1710 aa12□□□□□ -0.49
SNIP1-201ENST00000296215 DCXO43602 365 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SNRPAP09012 282 aaKnown RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 IFNAR1P17181 557 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 PRKAR1BP31321 381 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ATP5OP48047 213 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 STARP49675 285 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 DYNLT1P63172 113 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 GTF2IP78347 998 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 KCTD2Q14681 263 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 KRT39Q6A163 491 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 UGT2A3Q6UWM9 527 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 PLEKHG7Q6ZR37 379 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 FBXO30Q8TB52 745 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 NRG4Q8WWG1 115 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SGCDQ92629 289 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 TRIM43Q96BQ3 446 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 RMDN3Q96TC7 470 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 PSD2Q9BQI7 771 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 NINJ2Q9NZG7 142 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 PADI4Q9UM07 663 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ALG6Q9Y672 507 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SUPT6HQ7KZ85 1726 aaKnown RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 EML1O00423 815 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 HDAC3O15379 428 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 CTDNEP1O95476 244 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 NUDT7P0C024 238 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 IL18R1Q13478 541 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 DLG2Q15700 870 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 HECTD3Q5T447 861 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SLC44A2Q8IWA5 706 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF654Q8IZM8 581 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SLC38A6Q8IZM9 456 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 MCUQ8NE86 351 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SYN2Q92777 582 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SNAPC3Q92966 411 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 TCF7L2Q9NQB0 619 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 DYRK4Q9NR20 520 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 EBF1Q9UH73 591 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ACEP12821 1306 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 NEDD4P46934 1319 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 RIMS2Q9UQ26 1411 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 NTRK1P04629 796 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 WEE2P0C1S8 567 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF135P52742 658 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 NME5P56597 212 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 DEFA6Q01524 100 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 COASYQ13057 564 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 IKBIPQ70UQ0 350 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 POLNQ7Z5Q5 900 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 MYDGFQ969H8 173 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 CDK19Q9BWU1 502 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF696Q9H7X3 374 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 DDX43Q9NXZ2 648 aaKnown RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ABI2Q9NYB9 513 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 GTSE1Q9NYZ3 720 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SNX7Q9UNH6 387 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 AFG3L2Q9Y4W6 797 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ASTN2O75129 1339 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SYNJ2BP-COX16A0A087WUM0 186 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 KDM4BO94953 1096 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 HLA-FP30511 346 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 CAPZA1P52907 286 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 SSTP61278 116 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 YWHAEP62258 255 aaKnown RBP11.99□□□□□ -0.49
SNIP1-201ENST00000296215 GPR162Q16538 588 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 CCDC185Q8N715 623 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 PFDN5Q99471 154 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ZBTB18Q99592 522 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 C12orf10Q9HB07 376 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 CDH22Q9UJ99 828 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 ZMYM2Q9UBW7 1377 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
SNIP1-201ENST00000296215 PIPSLA2A3N6 862 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 HEATR9A2RTY3 570 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 KIAA0391O15091 583 aaKnown RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 ZNF254O75437 659 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 HMGN1P05114 100 aa11.98□□□□□ -0.49
SNIP1-201ENST00000296215 IL15P40933 162 aaPredicted RBP11.98□□□□□ -0.49
SNIP1-201ENST00000296215 TIMM10P62072 90 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms