RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 KRBA1A5PL33 1030 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 SHISA7A6NL88 538 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 NEDD8-MDP1E9PL57 170 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 PI4K2BG5E9Z4 385 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 TRDMT1O14717 391 aaKnown RBP13.68□□□□□ -0.22
CCDC42-201ENST00000293845 BUB1BO60566 1050 aaPredicted RBP13.68□□□□□ -0.22
CCDC42-201ENST00000293845 TYRP14679 529 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 TCF4P15884 667 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 IL1R2P27930 398 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 HOXD9P28356 352 aaPredicted RBP13.68□□□□□ -0.22
CCDC42-201ENST00000293845 GGCXP38435 758 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 OPRD1P41143 372 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 SOX9P48436 509 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 SGSHP51688 502 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 SEMA3BQ13214 749 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 HADHQ16836 314 aaKnown RBP13.68□□□□□ -0.22
CCDC42-201ENST00000293845 ANO4Q32M45 955 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 ERMARDQ5T6L9 678 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 TTC39BQ5VTQ0 682 aaPredicted RBP13.68□□□□□ -0.22
CCDC42-201ENST00000293845 C14orf80Q86SX3 495 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 LGI2Q8N0V4 545 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 TPCN2Q8NHX9 752 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 TTC8Q8TAM2 541 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 COL25A1Q9BXS0 654 aaPredicted RBP13.68□□□□□ -0.22
CCDC42-201ENST00000293845 SIK2Q9H0K1 926 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 PCSK1NQ9UHG2 260 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 FBXO10Q9UK96 956 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 FBXL21Q9UKT6 434 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 VANGL2Q9ULK5 521 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 AP4E1Q9UPM8 1137 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 A0A0C4DFX4 3053 aa13.68□□□□□ -0.22
CCDC42-201ENST00000293845 TRIOO75962 3097 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 E9PAM4 449 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 MAN2B1O00754 1011 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 BUB1O43683 1085 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 KRT86O43790 486 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 TSPAN3O60637 253 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 L1CAMP32004 1257 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 STARD6P59095 220 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 RPS24P62847 133 aaKnown RBP13.67□□□□□ -0.22
CCDC42-201ENST00000293845 IFI16Q16666 785 aaKnown RBP13.67□□□□□ -0.22
CCDC42-201ENST00000293845 RABGAP1LQ5R372 815 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 TXNDC11Q6PKC3 985 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 LRRC31Q6UY01 552 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 TPRG1Q6ZUI0 275 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 POLNQ7Z5Q5 900 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 C12orf40Q86WS4 652 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 CPNE8Q86YQ8 564 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
CCDC42-201ENST00000293845 ZNF557Q8N988 423 aaPredicted RBP13.67□□□□□ -0.22
CCDC42-201ENST00000293845 DDI1Q8WTU0 396 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 IGSF8Q969P0 613 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 SHDQ96IW2 340 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 ZNF830Q96NB3 372 aaPredicted RBP13.67□□□□□ -0.22
CCDC42-201ENST00000293845 RPRD1AQ96P16 312 aaPredicted RBP13.67□□□□□ -0.22
CCDC42-201ENST00000293845 XPO6Q96QU8 1125 aaKnown RBP13.67□□□□□ -0.22
CCDC42-201ENST00000293845 SLC2A11Q9BYW1 496 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 PLK2Q9NYY3 685 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 PPARGC1AQ9UBK2 798 aaKnown RBP13.67□□□□□ -0.22
CCDC42-201ENST00000293845 TRIM10Q9UDY6 481 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 OR12D3Q9UGF7 316 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 CA14Q9ULX7 337 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 PPP2R2CQ9Y2T4 447 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 SNX10Q9Y5X0 201 aa13.67□□□□□ -0.22
CCDC42-201ENST00000293845 A0A1B0GVM2 712 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 TCAF2A6NFQ2 919 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 DRGXA6NNA5 263 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.66□□□□□ -0.22
CCDC42-201ENST00000293845 FAM72CH0Y354 149 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 TBL1XO60907 577 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 TULP3O75386 442 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 LRIG2O94898 1065 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 KRT7P08729 469 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 RARAP10276 462 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 HOXC13P31276 330 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 HTR7P34969 479 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 ZNF135P52742 658 aaPredicted RBP13.66□□□□□ -0.22
CCDC42-201ENST00000293845 TAS2R40P59535 323 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 DPYSL2Q16555 572 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 FAM72AQ5TYM5 149 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 LRRC38Q5VT99 294 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 TXNRD3NBQ6F5E7 133 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 FAM72DQ6L9T8 149 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 TRIM67Q6ZTA4 783 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 CHST9Q7L1S5 443 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 FAM72BQ86X60 149 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 SUGP1Q8IWZ8 645 aaKnown RBP13.66□□□□□ -0.22
CCDC42-201ENST00000293845 PHTF2Q8N3S3 785 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 EXOC4Q96A65 974 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 MAGEB5Q9BZ81 275 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 RETREG1Q9H6L5 497 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 NEU3Q9UQ49 428 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 ALG6Q9Y672 507 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 NUP205Q92621 2012 aa13.66□□□□□ -0.22
CCDC42-201ENST00000293845 ATG2BQ96BY7 2078 aa13.65□□□□□ -0.22
CCDC42-201ENST00000293845 MACROD2A1Z1Q3 448 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms