RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 RNPEPQ9H4A4 650 aa13.61□□□□□ -0.23
SLC28A1-201ENST00000286749 ZNF358Q9NW07 568 aa13.61□□□□□ -0.23
SLC28A1-201ENST00000286749 PIM2Q9P1W9 311 aa13.61□□□□□ -0.23
SLC28A1-201ENST00000286749 MORF4L1Q9UBU8 362 aa13.61□□□□□ -0.23
SLC28A1-201ENST00000286749 NME7Q9Y5B8 376 aa13.61□□□□□ -0.23
SLC28A1-201ENST00000286749 NFKBIEO00221 500 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ZNF195O14628 629 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 HBP1O60381 514 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 RALBP11234 206 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ITGAXP20702 1163 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 PEX2P28328 305 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 AQP4P55087 323 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ABCE1P61221 599 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 MSLNQ13421 630 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 CUL3Q13618 768 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 CNPY1Q3B7I2 92 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 SH3D19Q5HYK7 790 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 TCHHL1Q5QJ38 904 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 RASIP1Q5U651 963 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 CES3Q6UWW8 571 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 HPS6Q86YV9 775 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ACTRT2Q8TDY3 377 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 GDPD5Q8WTR4 605 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ARNTL2Q8WYA1 636 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 KIF12Q96FN5 646 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 KLHL4Q9C0H6 718 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 SMARCAD1Q9H4L7 1026 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 COPG2Q9UBF2 871 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 SNX9Q9Y5X1 595 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 PLXNA1Q9UIW2 1896 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 PPEF2O14830 753 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ERVK-10P10266 1014 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 MLNP12872 115 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 PGAM1P18669 254 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 GRK2P25098 689 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 TYK2P29597 1187 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 GSTT1P30711 240 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 FDFT1P37268 417 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 PTPN9P43378 593 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 BTKQ06187 659 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ITGA9Q13797 1035 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 FAM187BQ17R55 369 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 LRRC8BQ6P9F7 803 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 FRMD7Q6ZUT3 714 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 TTC39CQ8N584 583 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 CMTM5Q96DZ9 223 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 PGLYRP2Q96PD5 576 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 OXCT2Q9BYC2 517 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 NFKBIZQ9BYH8 718 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 CXCL16Q9H2A7 254 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 SYBUQ9NX95 663 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 POMPQ9Y244 141 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 RNF103O00237 685 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 DGKIO75912 1065 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 TOMM70O94826 608 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 VTNP04004 478 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 SERPINB6P35237 376 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 SOWAHAQ2M3V2 549 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 LIN52Q52LA3 116 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 CMC1Q7Z7K0 106 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 APOBEC3FQ8IUX4 373 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 AZIN2Q96A70 460 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 OLFM3Q96PB7 478 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 C11orf84Q9BUA3 381 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 SPATA16Q9BXB7 569 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
SLC28A1-201ENST00000286749 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 DCXO43602 365 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 HCRTO43612 131 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 MFSD11O43934 449 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 OPHN1O60890 802 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 F7P08709 466 aaPredicted RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 SETSIPP0DME0 302 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 LCP1P13796 627 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 RAG1P15918 1043 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 ALOX15P16050 662 aaPredicted RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 MLH1P40692 756 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 TBL3Q12788 808 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 USP4Q13107 963 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 TRIP10Q15642 601 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 ST13P4Q8IZP2 240 aaPredicted RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 C7orf31Q8N865 590 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 JADE3Q92613 823 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 ATXN7L3BQ96GX2 97 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 FAM96AQ9H5X1 160 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 MAN1C1Q9NR34 630 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 SEPT10Q9P0V9 454 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 TXNDC16Q9P2K2 825 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 PAPPA2Q9BXP8 1791 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 STAU1O95793 577 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 MYL4P12829 197 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 INSRRP14616 1297 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 UQCRBP14927 111 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 CPA3P15088 417 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 PSMB4P28070 264 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms