RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 C11orf84Q9BUA3 381 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 SLC4A5Q9BY07 1137 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PRMT7Q9NVM4 692 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 NXF1Q9UBU9 619 aaKnown RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 AFG3L2Q9Y4W6 797 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 XIRP2A4UGR9 3374 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 AVILO75366 819 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 TFAP2AP05549 437 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 PFKMP08237 780 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 PDGFRAP16234 1089 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 PTPN9P43378 593 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 BCAR1P56945 870 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 SNX16P57768 344 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 FOLH1Q04609 750 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 TBL3Q12788 808 aaKnown RBP10.67□□□□□ -0.7
SKA1-201ENST00000285116 STX3Q13277 289 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 CCNIQ14094 377 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 KRT81Q14533 505 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 TRIP10Q15642 601 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 DPYSL2Q16555 572 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 KLHDC10Q6PID8 442 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 OLFML1Q6UWY5 402 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 FAM183BPQ6ZVS7 135 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 LRRC43Q8N309 656 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 MARVELD2Q8N4S9 558 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 PCDH19Q8TAB3 1148 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 CENPIQ92674 756 aaPredicted RBP10.67□□□□□ -0.7
SKA1-201ENST00000285116 GFM2Q969S9 779 aaKnown RBP10.67□□□□□ -0.7
SKA1-201ENST00000285116 ISL2Q96A47 359 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 NLRP4Q96MN2 994 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 GPR20Q99678 358 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 ZNF236Q9UL36 1845 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 PDCD11Q14690 1871 aaKnown RBP10.67□□□□□ -0.7
SKA1-201ENST00000285116 hCG_2014768A0A024R1R8 64 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 HACD1B0YJ81 288 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 DENRO43583 198 aaKnown RBP10.67□□□□□ -0.7
SKA1-201ENST00000285116 GLRA3O75311 464 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 NFICP08651 508 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 CCDC130P13994 396 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 GRK2P25098 689 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 RBL1P28749 1068 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 RPL34P49207 117 aaKnown RBP10.67□□□□□ -0.7
SKA1-201ENST00000285116 ADARP55265 1226 aaKnown RBP10.67□□□□□ -0.7
SKA1-201ENST00000285116 FSTL1Q12841 308 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 PGM2L1Q6PCE3 622 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 LBX2Q6XYB7 198 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 TMEM110Q86TL2 294 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 ADGRF2Q8IZF7 708 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 DNAJC1Q96KC8 554 aaKnown RBP10.67□□□□□ -0.7
SKA1-201ENST00000285116 Q9H521 79 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 MORF4L1Q9UBU8 362 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 HMGXB4Q9UGU5 601 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 DMTF1Q9Y222 760 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 PPP2R3BQ9Y5P8 575 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 MAD1L1Q9Y6D9 718 aa10.67□□□□□ -0.7
SKA1-201ENST00000285116 SF3B1O75533 1304 aaKnown RBP eCLIP10.66□□□□□ -0.71e-7■■■■■ 172.3
SKA1-201ENST00000285116 ARHGAP10A1A4S6 786 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 C6orf222P0C671 652 aaPredicted RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 CYP3A5P20815 502 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 FDFT1P37268 417 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 DCTN2Q13561 401 aaKnown RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 FBXL19Q6PCT2 694 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 CTAGE3PQ8IX95 158 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 NAT9Q9BTE0 207 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 NRDE2Q9H7Z3 1164 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 ELP3Q9H9T3 547 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 RCOR3Q9P2K3 495 aaPredicted RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 MEI4A8MW99 385 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 LACTBL1A8MY62 500 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 MYCP01106 439 aaPredicted RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 SRGAP2CP0DJJ0 459 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 CXCL8P10145 99 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 CDK4P11802 303 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 MAGEA12P43365 314 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 NRLP54845 237 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 CDH8P55286 799 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 SLC25A3Q00325 362 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 UBAP2LQ14157 1087 aaKnown RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 TEDDM1Q5T9Z0 273 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 EEF1DP3Q658K8 133 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 TMC7Q7Z402 723 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 APOBEC3FQ8IUX4 373 aaKnown RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 WDR75Q8IWA0 830 aaKnown RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 NDUFAF2Q8N183 169 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 PIWIL2Q8TC59 973 aaKnown RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 DIS3LQ8TF46 1054 aaKnown RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 KHSRPQ92945 711 aaKnown RBP eCLIP10.66□□□□□ -0.77e-7■■■□□ 16.7
SKA1-201ENST00000285116 MECRQ9BV79 373 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 MRPS26Q9BYN8 205 aaKnown RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 RBM38Q9H0Z9 239 aaKnown RBP10.66□□□□□ -0.7
SKA1-201ENST00000285116 GPRC5DQ9NZD1 345 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 DCDC2Q9UHG0 476 aa10.66□□□□□ -0.7
SKA1-201ENST00000285116 CITO14578 2027 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 CCDC160A6NGH7 325 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 FGF3P11487 239 aaPredicted RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 SERPINB6P35237 376 aa10.65□□□□□ -0.7
SKA1-201ENST00000285116 HARS2P49590 506 aaKnown RBP10.65□□□□□ -0.7
SKA1-201ENST00000285116 SLC6A3Q01959 620 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms