RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCDC110Q8TBZ0 833 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 TTC17Q96AE7 1141 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 SERAC1Q96JX3 654 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 TNIP3Q96KP6 325 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 ZNF184Q99676 751 aaPredicted RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 ADAM2Q99965 735 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 SNRNP25Q9BV90 132 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 CRTAC1Q9NQ79 661 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 KCNK4Q9NYG8 393 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 F8W810 466 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 INHBAP08476 426 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 IL4RP24394 825 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 PITX1P78337 314 aaPredicted RBP18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 DEFB115Q30KQ5 88 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 TMPRSS6Q8IU80 811 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 UNC45BQ8IWX7 931 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 GATA6Q92908 595 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 TMEM30AQ9NV96 361 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 SRRDQ9UH36 339 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 THSD7BQ9C0I4 1608 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 TCRBV7S3A2A0A539 114 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 MAP3K13O43283 966 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 SERPINB4P48594 390 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 THOC5Q13769 683 aaKnown RBP18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 PPP6R3Q5H9R7 873 aaPredicted RBP18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 C1orf228Q6PIY5 440 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 TRIM42Q8IWZ5 723 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 RHOBTB2Q9BYZ6 727 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 TRPV6Q9H1D0 765 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 ARHGEF4Q9NR80 690 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 CHST12Q9NRB3 414 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 CPSF2Q9P2I0 782 aaKnown RBP18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 CHMP2BQ9UQN3 213 aa18.87■□□□□ 0.61
PDLIM3-201ENST00000284767 MYBPHLA2RUH7 354 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 ANKRD33BA6NCL7 494 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 GABRDO14764 452 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 FAM155BO75949 473 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 ACLYP53396 1101 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 CACNA2D1P54289 1103 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 RNF220Q5VTB9 566 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 CCDC33Q8N5R6 958 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 DTX3LQ8TDB6 740 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 FAM149B1Q96BN6 582 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 NR1H4Q96RI1 486 aaPredicted RBP18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 PDP2Q9P2J9 529 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 MKI67P46013 3256 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 TCRBV9S1A1TA0A576 114 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 DPYSL4O14531 572 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 ENDOD1O94919 500 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 PYGBP11216 843 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 MAP3K7CLP57077 242 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 KRT81Q14533 505 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 TIGD5Q53EQ6 642 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 NET1Q7Z628 596 aaPredicted RBP18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 TTC7BQ86TV6 843 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 SPATA18Q8TC71 538 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 C7orf26Q96N11 449 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 TSPAN18Q96SJ8 248 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 KCNK16Q96T55 309 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 MED10Q9BTT4 135 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 NMUR2Q9GZQ4 415 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 KRT82Q9NSB4 513 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 SLC38A7Q9NVC3 462 aa18.86■□□□□ 0.61
PDLIM3-201ENST00000284767 SYNJ2BP-COX16A0A087WUM0 186 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 ELK3P41970 407 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 BRCC3P46736 316 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 FAAP100Q0VG06 881 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 CLEC20AQ6ZU45 233 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 SLC26A9Q7LBE3 791 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 FAM71DQ8N9W8 422 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 HNRNPABQ99729 332 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 DUSP16Q9BY84 665 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 FAM192AQ9GZU8 254 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 IQCGQ9H095 443 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 RSAD1Q9HA92 442 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 TMPRSS4Q9NRS4 437 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 COX16Q9P0S2 106 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 CASP8AP2Q9UKL3 1982 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 CAPN14A8MX76 684 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 APOC4-APOC2K7ER74 178 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 APOC2P02655 101 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 RBP3P10745 1247 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 RAB27AP51159 221 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 EIF3EP60228 445 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 BASP1P80723 227 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 CDK18Q07002 472 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 TRIM71Q2Q1W2 868 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 KBTBD12Q3ZCT8 623 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 SYCP2LQ5T4T6 812 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 CCDC185Q8N715 623 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 TBCBQ99426 244 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 PIDD1Q9HB75 910 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 PCDH18Q9HCL0 1135 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 PNPLA8Q9NP80 782 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 DNAJB4Q9UDY4 337 aa18.85■□□□□ 0.61
PDLIM3-201ENST00000284767 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 FAM237BA0A1B0GVD1 139 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 B2RBV5 119 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 COPEO14579 308 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 ATP5BP06576 529 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms