RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CHI3L2Q15782 390 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 METTL16Q86W50 562 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 IFNL1Q8IU54 200 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CBWD2Q8IUF1 395 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 EPHX4Q8IUS5 362 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MCEMP1Q8IX19 187 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 RERGQ96A58 199 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 HMX1Q9NP08 348 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SOHLH2Q9NX45 425 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ERVW-1Q9UQF0 538 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TDRKHQ9Y2W6 561 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ALG6Q9Y672 507 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KRT33AO76009 404 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 NTSR2O95665 410 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 KRT75O95678 551 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 DLGAP3O95886 979 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 MAPTP10636 758 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CYP11B1P15538 503 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CHN1P15882 459 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FXR1P51114 621 aaKnown RBP eCLIP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 IL2P60568 153 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ACTR3P61158 418 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 PPATQ06203 517 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 LGALS3BPQ08380 585 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ACAP1Q15027 740 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CBWD3Q5JTY5 395 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CBWD5Q5RIA9 395 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FAM180AQ6UWF9 173 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 NIPA1Q7RTP0 329 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 NKAPQ8N5F7 415 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 C19orf18Q8NEA5 215 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SGF29Q96ES7 293 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FICDQ9BVA6 458 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SPATC1LQ9H0A9 340 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 EXO5Q9H790 373 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SLC27A6Q9Y2P4 619 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 DCCP43146 1447 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 A0A087X0T9 212 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 MSH4O15457 936 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ZNF862O60290 1169 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CSH1P0DML2 217 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CSH2P0DML3 217 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ITGA2P17301 1181 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 POU1F1P28069 291 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CDC25CP30307 473 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 PSMD4P55036 377 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CDC42P60953 191 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 NOGQ13253 232 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 TERF2Q15554 542 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 GRIK4Q16099 956 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SMTNL2Q2TAL5 461 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 MDH1BQ5I0G3 518 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 MROH9Q5TGP6 573 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 UNC93AQ86WB7 457 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FBXO16Q8IX29 292 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 C4orf19Q8IY42 314 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CHPFQ8IZ52 775 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ATG16L2Q8NAA4 619 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 DDHD1Q8NEL9 900 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SLC30A5Q8TAD4 765 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 GAS2L1Q99501 681 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 DPY30Q9C005 99 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FAM192AQ9GZU8 254 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 PABPC3Q9H361 631 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 KCTD5Q9NXV2 234 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 MARCH2Q9P0N8 246 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 PLAGL2Q9UPG8 496 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CAMSAP1Q5T5Y3 1602 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ZNF521Q96K83 1311 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CNTNAP2Q9UHC6 1331 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SKAP2O75563 359 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 RECQL5O94762 991 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 MED26O95402 600 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ATP6V1B2P21281 511 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 OR1E1P30953 314 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 CLCN3P51790 818 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 NFYCQ13952 458 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FSCN1Q16658 493 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 DDR2Q16832 855 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FNDC3BQ53EP0 1204 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 INO80DQ53TQ3 878 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SAMD4BQ5PRF9 694 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FAM171A1Q5VUB5 890 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ZNF470Q6ECI4 717 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 RASGRP2Q7LDG7 609 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 TRMT2AQ8IZ69 625 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 RGL4Q8IZJ4 473 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SMYD1Q8NB12 490 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 RP9Q8TA86 221 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 TRIM51Q9BSJ1 452 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 KIAA1683Q9H0B3 1180 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 ALG13Q9NP73 1137 aaKnown RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 KLC4Q9NSK0 619 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 TMEM216Q9P0N5 145 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 FBXO2Q9UK22 296 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-201ENST00000283254 TAF6LQ9Y6J9 622 aa4.15□□□□□ -1.74
SCN3A-201ENST00000283254 SPATA31A5Q5VU36 1347 aa4.15□□□□□ -1.75
SCN3A-201ENST00000283254 SPATA31A7Q8IWB4 1347 aa4.15□□□□□ -1.75
SCN3A-201ENST00000283254 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.15□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3BA6NDS4 549 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1008.6 ms