RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 KLHL33A6NCF5 533 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 GJB5O95377 273 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 TGM2P21980 687 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 SSTR1P30872 391 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 MAGEA4P43358 317 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 ARL13BQ3SXY8 428 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
GGPS1-201ENST00000282841 P2RY11Q96G91 374 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 CYP2S1Q96SQ9 504 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 SH3GL2Q99962 352 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 TMEM175Q9BSA9 504 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 GKN1Q9NS71 199 aa11.32□□□□□ -0.6
GGPS1-201ENST00000282841 SLC12A8A0AV02 714 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 SLC38A8A6NNN8 435 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 GRXCR1A8MXD5 290 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 USP12O75317 370 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 MYZAPP0CAP1 466 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 PLD1Q13393 1074 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 EFTUD2Q15029 972 aaKnown RBP eCLIP11.31□□□□□ -0.67e-7■□□□□ 9.7
GGPS1-201ENST00000282841 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
GGPS1-201ENST00000282841 SMYD5Q6GMV2 418 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 MON1AQ86VX9 555 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 SLC39A11Q8N1S5 342 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 CFAP52Q8N1V2 620 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 AGGF1Q8N302 714 aaeCLIP11.31□□□□□ -0.6
GGPS1-201ENST00000282841 EIF1ADQ8N9N8 165 aaKnown RBP11.31□□□□□ -0.6
GGPS1-201ENST00000282841 COLGALT1Q8NBJ5 622 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 IRGQQ8WZA9 623 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 FUBP3Q96I24 572 aaKnown RBP eCLIP11.31□□□□□ -0.6
GGPS1-201ENST00000282841 C8orf48Q96LL4 319 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 VPS37BQ9H9H4 285 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 SMPD4Q9NXE4 827 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 CHMP2BQ9UQN3 213 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 SCML2Q9UQR0 700 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 DCLK1O15075 740 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 IRF1P10914 325 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 CREB1P16220 341 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 LMAN1P49257 510 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 SLC45A4Q5BKX6 768 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 PIK3R6Q5UE93 754 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 ZCCHC9Q8N567 271 aaKnown RBP11.31□□□□□ -0.6
GGPS1-201ENST00000282841 NAT8LQ8N9F0 302 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 TFB1MQ8WVM0 346 aaKnown RBP11.31□□□□□ -0.6
GGPS1-201ENST00000282841 BHMTQ93088 406 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 PAIP2Q9BPZ3 127 aaKnown RBP11.31□□□□□ -0.6
GGPS1-201ENST00000282841 PNPLA8Q9NP80 782 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 MTRRQ9UBK8 725 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
GGPS1-201ENST00000282841 HS3ST4Q9Y661 456 aa11.31□□□□□ -0.6
GGPS1-201ENST00000282841 H7C4K7 107 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 RNF103O00237 685 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 PRRG1O14668 218 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 KIAA0355O15063 1070 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 OPA1O60313 960 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 TLR5O60602 858 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 CNTN5O94779 1100 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 F7P08709 466 aaPredicted RBP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 GJA1P17302 382 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 CCR1P32246 355 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 ACTN2P35609 894 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 TUBP50607 506 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 SF3A3Q12874 501 aaKnown RBP eCLIP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 ELAVL2Q12926 359 aaKnown RBP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 SEMA3BQ13214 749 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 HIF1AQ16665 826 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 RAP1GAP2Q684P5 730 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 RFWD3Q6PCD5 774 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 KDELC2Q7Z4H8 507 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 HTR3CQ8WXA8 447 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 APOL2Q9BQE5 337 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 NACA2Q9H009 215 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 RC3H2Q9HBD1 1191 aaKnown RBP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 MARCH2Q9P0N8 246 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 TTC24A2A3L6 582 aaPredicted RBP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 C2orf78A6NCI8 922 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 GOLGA6L10A6NI86 522 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 POC1B-GALNT4F8VUJ3 575 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 NRG2O14511 850 aaPredicted RBP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 TTC4O95801 387 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 F9P00740 461 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 IGLV3-25P01717 112 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 SOD2P04179 222 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 GLUD2P49448 558 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 TBX4P57082 545 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 SLMAPQ14BN4 828 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 SLC8B1Q6J4K2 584 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 PPIL6Q8IXY8 311 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 MPP5Q8N3R9 675 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 KLHL23Q8NBE8 558 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 MDM1Q8TC05 714 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 SPPL2BQ8TCT7 592 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 WBP2Q969T9 261 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 SMOC2Q9H3U7 446 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 FBXO44Q9H4M3 255 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 TMBIM4Q9HC24 238 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.3□□□□□ -0.6
GGPS1-201ENST00000282841 PRKAG2Q9UGJ0 569 aa11.3□□□□□ -0.6
GGPS1-201ENST00000282841 CCDC78A2IDD5 438 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms