RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZNF534Q76KX8 674 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 DSEQ9UL01 958 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 GRID1Q9ULK0 1009 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 DFFAO00273 331 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 STK10O94804 968 aaKnown RBP18.47■□□□□ 0.55
CAPN1-201ENST00000279247 CCL23P55773 120 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 LVRNQ6Q4G3 990 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 UNC5AQ6ZN44 842 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 CKAP2Q8WWK9 683 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 CSNK1G1Q9HCP0 422 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 SMYD2Q9NRG4 433 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 SLC17A7Q9P2U7 560 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 PPP1R12AO14974 1030 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-201ENST00000279247 ADRA1DP25100 572 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 MGAT1P26572 445 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 IL9RQ01113 521 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 NMUR1Q9HB89 426 aa18.47■□□□□ 0.55
CAPN1-201ENST00000279247 C5orf60A6NFR6 353 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 DCLK1O15075 740 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 NBNO60934 754 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 CYP11A1P05108 521 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 FAM163BP0C2L3 166 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 WASHC5Q12768 1159 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 FAM26DQ5JW98 314 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 VSIG1Q86XK7 387 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 CASP10Q92851 521 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 SERAC1Q96JX3 654 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 A0A1W2PQH9 124 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 NEFHP12036 1026 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 ADGRD1Q6QNK2 874 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 BZW1Q7L1Q6 419 aaKnown RBP18.46■□□□□ 0.55
CAPN1-201ENST00000279247 DEFB128Q7Z7B8 93 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 TDRPQ86YL5 185 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 TCP10LQ8TDR4 215 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 EPAS1Q99814 870 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 PPP1R12CQ9BZL4 782 aa18.46■□□□□ 0.55
CAPN1-201ENST00000279247 NSRP1Q9H0G5 558 aaKnown RBP18.46■□□□□ 0.55
CAPN1-201ENST00000279247 TRIM49D1C9J1S8 452 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 ARVCFO00192 962 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 SMAPO00193 183 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 PYGBP11216 843 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 PPP2R5DQ14738 602 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 CTXN3Q4LDR2 81 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 MROH9Q5TGP6 573 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 COLGALT2Q8IYK4 626 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 ANKS4BQ8N8V4 417 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 FERMT1Q9BQL6 677 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 GPR62Q9BZJ7 368 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 SLC13A1Q9BZW2 595 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 H0YHG0 523 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 HMBSP08397 361 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 NR1H3Q13133 447 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 FAM133BQ5BKY9 247 aaKnown RBP18.45■□□□□ 0.54
CAPN1-201ENST00000279247 VARS2Q5ST30 1063 aaKnown RBP18.45■□□□□ 0.54
CAPN1-201ENST00000279247 C4orf50Q6ZRC1 276 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 ARHGAP36Q6ZRI8 547 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 BNIPLQ7Z465 357 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 SIGLEC10Q96LC7 697 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 PKMYT1Q99640 499 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 PLAC1Q9HBJ0 212 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 MPP6Q9NZW5 540 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 RCOR3Q9P2K3 495 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-201ENST00000279247 LRFN2Q9ULH4 789 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 CAPN7Q9Y6W3 813 aa18.45■□□□□ 0.54
CAPN1-201ENST00000279247 SRRM3A6NNA2 597 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-201ENST00000279247 TBX18O95935 607 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 CPB1P15086 417 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 KDELC2Q7Z4H8 507 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 LRRC6Q86X45 466 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 UROC1Q96N76 676 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 E2F8A0AVK6 867 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 ZNF487B1APH4 448 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 ZBTB24O43167 697 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-201ENST00000279247 JCHAINP01591 159 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 CSH1P0DML2 217 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 CSH2P0DML3 217 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 MAPRE1Q15691 268 aaKnown RBP18.44■□□□□ 0.54
CAPN1-201ENST00000279247 MIB1Q86YT6 1006 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 DNAAF3Q8N9W5 541 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 OR52K1Q8NGK4 314 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 SEPT5Q99719 369 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-201ENST00000279247 PITPNM3Q9BZ71 974 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 OSER1Q9NX31 292 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 PCDHB8Q9UN66 801 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 PCDHB7Q9Y5E2 793 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 F9P00740 461 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 TAC1P20366 129 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 CXCR3P49682 368 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 USP46P62068 366 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 PRKD1Q15139 912 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-201ENST00000279247 PSTKQ8IV42 348 aaKnown RBP18.44■□□□□ 0.54
CAPN1-201ENST00000279247 ATXN7L3BQ96GX2 97 aa18.44■□□□□ 0.54
CAPN1-201ENST00000279247 EBNA1BP2Q99848 306 aaKnown RBP18.44■□□□□ 0.54
CAPN1-201ENST00000279247 ASMTLO95671 621 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 EOMESO95936 686 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 SELPP16109 830 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 TPH1P17752 444 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 PTPN3P26045 913 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 IRX4P78413 519 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 ZBTB17Q13105 803 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms