RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 PYROXD2Q8N2H3 581 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 PAWRQ96IZ0 340 aaKnown RBP14.71□□□□□ -0.06
TMEM47-201ENST00000275954 C12orf42Q96LP6 360 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 EGFL8Q99944 293 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 SUN2Q9UH99 717 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 CDY1Q9Y6F8 540 aa14.71□□□□□ -0.06
TMEM47-201ENST00000275954 SUPT7LO94864 414 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 NUDT2P50583 147 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 GAD2Q05329 585 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 BST1Q10588 318 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 DNAL1Q4LDG9 190 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 SDHAF4Q5VUM1 108 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 MIPOL1Q8TD10 442 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 GPR152Q8TDT2 470 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 TRIB2Q92519 343 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 WNT8BQ93098 351 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 TLCD1Q96CP7 247 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 TRIM62Q9BVG3 475 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 ILKAPQ9H0C8 392 aaPredicted RBP14.7□□□□□ -0.06
TMEM47-201ENST00000275954 UNC93B1Q9H1C4 597 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 ACSS2Q9NR19 701 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 OR12D3Q9UGF7 316 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 PACSIN3Q9UKS6 424 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 A0A096LPK6 155 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 SMIM28A0A1B0GU29 152 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 BUD23O43709 281 aaKnown RBP14.7□□□□□ -0.06
TMEM47-201ENST00000275954 NPR3P17342 541 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 ERCC2P18074 760 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 COPAP53621 1224 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 NME5P56597 212 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 CSHL1Q14406 222 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 LRRC8EQ6NSJ5 796 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 GALNT4Q8N4A0 578 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 PLD5Q8N7P1 536 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 STKLD1Q8NE28 680 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 AGAP11Q8TF27 550 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 CXorf56Q9H5V9 222 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 POPDC2Q9HBU9 364 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 KLHL2O95198 593 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 PTPN4P29074 926 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 PDAP1Q13442 181 aaKnown RBP14.7□□□□□ -0.06
TMEM47-201ENST00000275954 CRELD2Q6UXH1 353 aaPredicted RBP14.7□□□□□ -0.06
TMEM47-201ENST00000275954 OTOAQ7RTW8 1153 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 FBXO32Q969P5 355 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 FGD4Q96M96 766 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 BRWD3Q6RI45 1802 aa14.7□□□□□ -0.06
TMEM47-201ENST00000275954 GNGT2O14610 69 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 KIF3CO14782 793 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 LMO2P25791 158 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 NOS2P35228 1153 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 CSE1LP55060 971 aaKnown RBP14.69□□□□□ -0.06
TMEM47-201ENST00000275954 NOL9Q5SY16 702 aaKnown RBP14.69□□□□□ -0.06
TMEM47-201ENST00000275954 TMCO2Q7Z6W1 182 aaPredicted RBP14.69□□□□□ -0.06
TMEM47-201ENST00000275954 DCP1BQ8IZD4 617 aaKnown RBP14.69□□□□□ -0.06
TMEM47-201ENST00000275954 ICA1LQ8NDH6 482 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 CLEC4CQ8WTT0 213 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 CMTM5Q96DZ9 223 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 PHF21BQ96EK2 531 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 LHX5Q9H2C1 402 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 SRRDQ9UH36 339 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 AURKCQ9UQB9 309 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 GVINP1Q7Z2Y8 2422 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 RNF103-CHMP3A0A140T963 221 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 ENO4A6NNW6 628 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 HNRNPCL1O60812 293 aaKnown RBP14.69□□□□□ -0.06
TMEM47-201ENST00000275954 ANXA9O76027 345 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 WEE1P30291 646 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 GP5P40197 560 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 TUBP50607 506 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 PDK4Q16654 411 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 LCLAT1Q6UWP7 414 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 TNS4Q8IZW8 715 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 DDX1Q92499 740 aaKnown RBP14.69□□□□□ -0.06
TMEM47-201ENST00000275954 HIPK3Q9H422 1215 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 DLGAP2Q9P1A6 1054 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 DCDC2Q9UHG0 476 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 TJP1Q07157 1748 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 SLC12A8A0AV02 714 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 HCRTO43612 131 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 TSPAN1O60635 241 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 ENTPD5O75356 428 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 NDUFS3O75489 264 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 KRT16P08779 473 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 PLIN5Q00G26 463 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 YTHDF3Q7Z739 585 aaKnown RBP14.69□□□□□ -0.06
TMEM47-201ENST00000275954 NT5DC4Q86YG4 428 aa14.69□□□□□ -0.06
TMEM47-201ENST00000275954 NKD2Q969F2 451 aaPredicted RBP14.69□□□□□ -0.06
TMEM47-201ENST00000275954 CACNA1SQ13698 1873 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 A0A0A0MRY4 1105 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 PAPSS1O43252 624 aaPredicted RBP14.68□□□□□ -0.06
TMEM47-201ENST00000275954 TPST1O60507 370 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 GRM5P41594 1212 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 BRCC3P46736 316 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 KLC1Q07866 573 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 CTXN3Q4LDR2 81 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 TMTC4Q5T4D3 741 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 UNC93AQ86WB7 457 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 CNPY4Q8N129 248 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 NUP93Q8N1F7 819 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 FITM2Q8N6M3 262 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms