RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 PCDHA6Q9UN73 950 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 MAU2Q9Y6X3 613 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ARPC4-TTLL3A0A0A6YYG9 625 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 H0YJX3 145 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 RPS6KA4O75676 772 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 RNASEH2AO75792 299 aaKnown RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 FTLP02792 175 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 MATN1P21941 496 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 CCNCP24863 283 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 GPX6P59796 221 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 PRAMEP78395 509 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 TMPRSS15P98073 1019 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 COASYQ13057 564 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 DSC3Q14574 896 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 POU6F1Q14863 301 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ATG16L1Q676U5 607 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 IQSEC1Q6DN90 963 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 PRR23BQ6ZRT6 265 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 DGLUCYQ7Z3D6 616 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ZNF786Q8N393 782 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ZSWIM2Q8NEG5 633 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ANKRD60Q9BZ19 345 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ATP13A3Q9H7F0 1226 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 SCPEP1Q9HB40 452 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 HMG20AQ9NP66 347 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 MCM9Q9NXL9 1143 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 TMEM9Q9P0T7 183 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 SUCOQ9UBS9 1254 aaKnown RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 TESMINQ9Y4I5 508 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 PCDHA8Q9Y5H6 950 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 SMIM22K7EJ46 135 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 NADKO95544 446 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 TBXAS1P24557 533 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ADSSP30520 456 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 SERPINB1P30740 379 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 GRSF1Q12849 480 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 FLOT2Q14254 428 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 GNA13Q14344 377 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 DCAF17Q5H9S7 520 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 FAM26FQ5R3K3 315 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 TRAF7Q6Q0C0 670 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 FKBP9P1Q75LS8 142 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 CADM2Q8N3J6 435 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 LILRB2Q8N423 598 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ETNPPLQ8TBG4 499 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 GPKOWQ92917 476 aaPredicted RBP eCLIP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 VPS33AQ96AX1 596 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 OMA1Q96E52 524 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 SERAC1Q96JX3 654 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 PAFAH2Q99487 392 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 FOXP3Q9BZS1 431 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 SEMA6AQ9H2E6 1030 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 GCNT4Q9P109 453 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 SRP68Q9UHB9 627 aaKnown RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 NARFQ9UHQ1 456 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 CCNL1Q9UK58 526 aaPredicted RBP9.45□□□□□ -0.9
PDGFC-201ENST00000274071 DNAJC12Q9UKB3 198 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 AFG3L2Q9Y4W6 797 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 PCDHB4Q9Y5E5 795 aa9.45□□□□□ -0.9
PDGFC-201ENST00000274071 BCORQ6W2J9 1755 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 TRIM64A6NGJ6 449 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 E9PMD0 336 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 H0YIN7 160 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 TK2O00142 265 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 MEN1O00255 615 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 FAM189A1O60320 539 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 MT-ND3P03897 115 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 NCAM1P13591 858 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 NR2F2P24468 414 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 RRM2P31350 389 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 OR3A3P47888 321 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 RAD23AP54725 363 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 TTC33Q6PID6 262 aaPredicted RBP9.44□□□□□ -0.9
PDGFC-201ENST00000274071 CRLF3Q8IUI8 442 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 ZC3H3Q8IXZ2 948 aaKnown RBP9.44□□□□□ -0.9
PDGFC-201ENST00000274071 MAGEB6Q8N7X4 407 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 PDPRQ8NCN5 879 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 ZC3H15Q8WU90 426 aaKnown RBP9.44□□□□□ -0.9
PDGFC-201ENST00000274071 DHRS4Q9BTZ2 278 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 MKRN2Q9H000 416 aaKnown RBP9.44□□□□□ -0.9
PDGFC-201ENST00000274071 NOP56O00567 594 aaKnown RBP9.44□□□□□ -0.9
PDGFC-201ENST00000274071 MTSS1O43312 755 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 RFPL2O75678 378 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 MFN2O95140 757 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 DBTP11182 482 aaKnown RBP9.44□□□□□ -0.9
PDGFC-201ENST00000274071 XRCC5P13010 732 aaKnown RBP9.44□□□□□ -0.9
PDGFC-201ENST00000274071 SSTR1P30872 391 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 NUDT1P36639 197 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 CBX5P45973 191 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 SLC9A3P48764 834 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 HK2P52789 917 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 PRKAA2P54646 552 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 GPC5P78333 572 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 GPLD1P80108 840 aa9.44□□□□□ -0.9
PDGFC-201ENST00000274071 MS4A2Q01362 244 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms