RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CDK4P11802 303 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 ZNF143P52747 638 aaPredicted RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 IRF9Q00978 393 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 EEF1DP3Q658K8 133 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 MAP7D3Q8IWC1 876 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 LILRA2Q8N149 483 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 JADE3Q92613 823 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 ZNF512Q96ME7 567 aaPredicted RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 FRMD8P1Q9BZ68 369 aaPredicted RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 DEFB129Q9H1M3 183 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 PCDH18Q9HCL0 1135 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 VWA5AO00534 786 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 WDR46O15213 610 aaKnown RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 MED7O43513 233 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 PLA2G6O60733 806 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 DKC1O60832 514 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 NFICP08651 508 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 CPA3P15088 417 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 CDH5P33151 784 aaPredicted RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 MTTPP55157 894 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 ADARP55265 1226 aaKnown RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 TMEM62Q0P6H9 643 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 STILQ15468 1287 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 SNX31Q8N9S9 440 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 NSUN6Q8TEA1 469 aaKnown RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 RCN3Q96D15 328 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 CATSPER2Q96P56 530 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 PKP2Q99959 881 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 NUF2Q9BZD4 464 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 COPG2Q9UBF2 871 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 SYNPO2Q9UMS6 1093 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 PCDHA11Q9Y5I1 949 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 HOXC6P09630 235 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 SLC5A2P31639 672 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 GLRBP48167 497 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 LTBP1Q14766 1721 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 FAM47CQ5HY64 1035 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 FAM219BQ5XKK7 198 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 MAP1SQ66K74 1059 aaPredicted RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 TSHZ1Q6ZSZ6 1077 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 GPRASP2Q96D09 838 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 CNPY3Q9BT09 278 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
COL8A1-202ENST00000273342 PTTG2Q9NZH5 202 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 SH3BP1Q9Y3L3 701 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 ZNF711Q9Y462 761 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 GJA3Q9Y6H8 435 aa13.26□□□□□ -0.29
COL8A1-202ENST00000273342 DNAH12Q6ZR08 3092 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 GLRA3O75311 464 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 FBXO21O94952 628 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 LTFP02788 710 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 CYP2F1P24903 491 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 MPSTP25325 297 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 ARL2P36404 184 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 GPD2P43304 727 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 CNTN2Q02246 1040 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 CCDC14Q49A88 953 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 RARS2Q5T160 578 aaKnown RBP13.25□□□□□ -0.29
COL8A1-202ENST00000273342 OGFRL1Q5TC84 451 aaPredicted RBP13.25□□□□□ -0.29
COL8A1-202ENST00000273342 TRIM67Q6ZTA4 783 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 PYROXD2Q8N2H3 581 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 KLHL23Q8NBE8 558 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 FNIP1Q8TF40 1166 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 ANKRD36BP1Q96IX9 119 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 KCNK16Q96T55 309 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 CCDC28BQ9BUN5 200 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 PSMD13Q9UNM6 376 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 ZNF195O14628 629 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 ATP6V1G1O75348 118 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 PRKCGP05129 697 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 PRKCBP05771 671 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 ARSAP15289 507 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
COL8A1-202ENST00000273342 TPP2P29144 1249 aaPredicted RBP13.25□□□□□ -0.29
COL8A1-202ENST00000273342 SAMD7Q7Z3H4 446 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 DSELQ8IZU8 1212 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 CAAP1Q9H8G2 361 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 QSER1Q2KHR3 1735 aa13.25□□□□□ -0.29
COL8A1-202ENST00000273342 LOXHD1Q8IVV2 1947 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.24□□□□□ -0.29
COL8A1-202ENST00000273342 C2CD4BA6NLJ0 364 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 OGTO15294 1046 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 MSCO60682 206 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 CDH15P55291 814 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 HEATR6Q6AI08 1181 aaKnown RBP13.24□□□□□ -0.29
COL8A1-202ENST00000273342 DUS1LQ6P1R4 473 aaKnown RBP13.24□□□□□ -0.29
COL8A1-202ENST00000273342 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 TRIML2Q8N7C3 387 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 CCNYQ8ND76 341 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 AGAP2Q99490 1192 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 MRPL4Q9BYD3 311 aaKnown RBP13.24□□□□□ -0.29
COL8A1-202ENST00000273342 SENP6Q9GZR1 1112 aaPredicted RBP13.24□□□□□ -0.29
COL8A1-202ENST00000273342 TCF7L2Q9NQB0 619 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 SORCS3Q9UPU3 1222 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 P4HA1P13674 534 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 STT3AP46977 705 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 SERPINB9P50453 376 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 PPIDQ08752 370 aaKnown RBP13.24□□□□□ -0.29
COL8A1-202ENST00000273342 SPATA6LQ8N4H0 392 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms