RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 CPSF4O95639 269 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 ATF4P18848 351 aaPredicted RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 S100A2P29034 98 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 TYSND1Q2T9J0 566 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 PRR5LQ6MZQ0 368 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 TUBA3EQ6PEY2 450 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 RPTNQ6XPR3 784 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 MINDY2Q8NBR6 621 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 ACTRT1Q8TDG2 376 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 CELF4Q9BZC1 486 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 ZCCHC2Q9C0B9 1178 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 GRAP2O75791 330 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 PIK3CGP48736 1102 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 KLF6Q99612 283 aaPredicted RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 TRIT1Q9H3H1 467 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 TMEM216Q9P0N5 145 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 IL2P60568 153 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 NAA20P61599 178 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 FRG1Q14331 258 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 SLC9A6Q92581 669 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 MAGEB10Q96LZ2 347 aaPredicted RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 EHD1Q9H4M9 534 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 CAB39LQ9H9S4 337 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 AGPAT5Q9NUQ2 364 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 CIDEBQ9UHD4 219 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 USP18Q9UMW8 372 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 UGGT1Q9NYU2 1555 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 EPN2O95208 641 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 STAU1O95793 577 aaKnown RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 HMBSP08397 361 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 EPHB2P29323 1055 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 PLCL1Q15111 1095 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 STRIP1Q5VSL9 837 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 NECAB2Q7Z6G3 386 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 TBC1D10CQ8IV04 446 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 OR52L1Q8NGH7 329 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 RIBC2Q9H4K1 309 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 TMBIM4Q9HC24 238 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 GPN1Q9HCN4 374 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 SAR1AQ9NR31 198 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 C2CD2Q9Y426 696 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 UBOX5O94941 541 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 NME5P56597 212 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ARPC4P59998 168 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ZFP69Q49AA0 526 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 USF2Q15853 346 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 CD302Q8IX05 232 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 PSMA8Q8TAA3 256 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 EPB41L1Q9H4G0 881 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 REEP1Q9H902 201 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 FASTKQ14296 549 aaKnown RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ZMYND11Q15326 602 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 TNFAIP8L3Q5GJ75 292 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ZC3H10Q96K80 434 aaKnown RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 RPRD1AQ96P16 312 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ZNF518BQ9C0D4 1074 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 LIN7AO14910 233 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 GRPEL2Q8TAA5 225 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 SPPL2AQ8TCT8 520 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 RPS6KA6Q9UK32 745 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ARHGEF33A8MVX0 844 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 FAM25EA8MYX2 175 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 TMCC2O75069 709 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 DDX39BQ13838 428 aaKnown RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 RIPOR1Q6ZS17 1223 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 EPS8L3Q8TE67 593 aaKnown RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 SLC38A2Q96QD8 506 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 DCP1AQ9NPI6 582 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 NCF1BA6NI72 391 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 NCF1CA8MVU1 366 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 GH1P01241 217 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 TXNP10599 105 aaKnown RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 NCF1P14598 390 aaPredicted RBP12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ATF6P18850 670 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 ITGALP20701 1170 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 CAPGP40121 348 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 CDK7P50613 346 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 OXCT1P55809 520 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 NAB1Q13506 487 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 SPANXN3Q5MJ09 141 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 DENND5BQ6ZUT9 1274 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
SRRM4-201ENST00000267260 RENBPP51606 427 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 AMPD2Q01433 879 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 TSGA10IPQ3SY00 556 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CYP20A1Q6UW02 462 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 RNF19BQ6ZMZ0 732 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PNKPQ96T60 521 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 SPATA5L1Q9BVQ7 753 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CROTQ9UKG9 612 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms