RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 NUDCD3Q8IVD9 361 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 DEPDC4Q8N2C3 294 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CPT1BQ92523 772 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 MOCOSQ96EN8 888 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 ACSS2Q9NR19 701 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 GID8Q9NWU2 228 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 NYAP2Q9P242 653 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 TCEAL9Q9UHQ7 104 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CARD8Q9Y2G2 431 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 TTLL3Q9Y4R7 772 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CPQQ9Y646 472 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CDK5RAP2Q96SN8 1893 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 TCRBV9S1A1TA0A576 114 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 ESYT2A0FGR8 921 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CFAP99D6REC4 459 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 COPEO14579 308 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 KLF11O14901 512 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 SEC24DO94855 1032 aaPredicted RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 GSRP00390 522 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 IL1BP01584 269 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 ATF7P17544 494 aaPredicted RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 PTGER2P43116 358 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 TRIM16LQ309B1 348 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 LSM12Q3MHD2 195 aaKnown RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 SEMA4DQ92854 862 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 ATP6V1E2Q96A05 226 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 ACDQ96AP0 544 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 P2RX7Q99572 595 aaKnown RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 RNF38Q9H0F5 515 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 TP63Q9H3D4 680 aaPredicted RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 EPS8L2Q9H6S3 715 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CXorf21Q9HAI6 301 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 SIRPGQ9P1W8 387 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 PLLPQ9Y342 182 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CNTNAP1P78357 1384 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CNTNAP2Q9UHC6 1331 aa9□□□□□ -0.97
VAPB-201ENST00000265619 IQCA1LA6NCM1 817 aa9□□□□□ -0.97
VAPB-201ENST00000265619 AIM2O14862 343 aa9□□□□□ -0.97
VAPB-201ENST00000265619 AXIN1O15169 862 aa9□□□□□ -0.97
VAPB-201ENST00000265619 APOEP02649 317 aa9□□□□□ -0.97
VAPB-201ENST00000265619 ASNSP08243 561 aa9□□□□□ -0.97
VAPB-201ENST00000265619 JAK1P23458 1154 aa9□□□□□ -0.97
VAPB-201ENST00000265619 MAN1A1P33908 653 aa9□□□□□ -0.97
VAPB-201ENST00000265619 CLK3P49761 638 aaKnown RBP9□□□□□ -0.97
VAPB-201ENST00000265619 STX3Q13277 289 aa9□□□□□ -0.97
VAPB-201ENST00000265619 CEACAM7Q14002 265 aa9□□□□□ -0.97
VAPB-201ENST00000265619 OXA1LQ15070 435 aa9□□□□□ -0.97
VAPB-201ENST00000265619 BMT2Q1RMZ1 405 aa9□□□□□ -0.97
VAPB-201ENST00000265619 CLEC16AQ2KHT3 1053 aa9□□□□□ -0.97
VAPB-201ENST00000265619 RINT1Q6NUQ1 792 aa9□□□□□ -0.97
VAPB-201ENST00000265619 MFSD7Q6UXD7 560 aa9□□□□□ -0.97
VAPB-201ENST00000265619 MIER3Q7Z3K6 550 aa9□□□□□ -0.97
VAPB-201ENST00000265619 CRLF3Q8IUI8 442 aa9□□□□□ -0.97
VAPB-201ENST00000265619 FAM47BQ8NA70 645 aa9□□□□□ -0.97
VAPB-201ENST00000265619 BBOF1Q8ND07 529 aa9□□□□□ -0.97
VAPB-201ENST00000265619 RMND5BQ96G75 393 aaPredicted RBP9□□□□□ -0.97
VAPB-201ENST00000265619 NLRP4Q96MN2 994 aa9□□□□□ -0.97
VAPB-201ENST00000265619 HAUS8Q9BT25 410 aa9□□□□□ -0.97
VAPB-201ENST00000265619 NPLQ9BXD5 320 aaPredicted RBP9□□□□□ -0.97
VAPB-201ENST00000265619 GPRC5CQ9NQ84 441 aa9□□□□□ -0.97
VAPB-201ENST00000265619 MYRFQ9Y2G1 1151 aa9□□□□□ -0.97
VAPB-201ENST00000265619 PCDHGA11Q9Y5H2 935 aa9□□□□□ -0.97
VAPB-201ENST00000265619 IGKV6D-41A0A0C4DH26 115 aa9□□□□□ -0.97
VAPB-201ENST00000265619 PRSS51A0A1B0GVH4 220 aa9□□□□□ -0.97
VAPB-201ENST00000265619 TOM1L1O75674 476 aa9□□□□□ -0.97
VAPB-201ENST00000265619 AMHP03971 560 aa9□□□□□ -0.97
VAPB-201ENST00000265619 CYP11B1P15538 503 aa9□□□□□ -0.97
VAPB-201ENST00000265619 QARSP47897 775 aaKnown RBP9□□□□□ -0.97
VAPB-201ENST00000265619 IDH3AP50213 366 aa9□□□□□ -0.97
VAPB-201ENST00000265619 SPIRE1Q08AE8 756 aa9□□□□□ -0.97
VAPB-201ENST00000265619 C9orf131Q5VYM1 1079 aa9□□□□□ -0.97
VAPB-201ENST00000265619 RWDD4Q6NW29 188 aaKnown RBP9□□□□□ -0.97
VAPB-201ENST00000265619 PIWIL3Q7Z3Z3 882 aaKnown RBP9□□□□□ -0.97
VAPB-201ENST00000265619 DDX1Q92499 740 aaKnown RBP9□□□□□ -0.97
VAPB-201ENST00000265619 PPP1R36Q96LQ0 422 aa9□□□□□ -0.97
VAPB-201ENST00000265619 CDRT15Q96T59 188 aa9□□□□□ -0.97
VAPB-201ENST00000265619 MRPL46Q9H2W6 279 aaKnown RBP9□□□□□ -0.97
VAPB-201ENST00000265619 SCUBE2Q9NQ36 999 aa9□□□□□ -0.97
VAPB-201ENST00000265619 SMYD2Q9NRG4 433 aa9□□□□□ -0.97
VAPB-201ENST00000265619 SFMBT1Q9UHJ3 866 aa9□□□□□ -0.97
VAPB-201ENST00000265619 ITGA11Q9UKX5 1188 aa9□□□□□ -0.97
VAPB-201ENST00000265619 FARP1Q9Y4F1 1045 aaPredicted RBP9□□□□□ -0.97
VAPB-201ENST00000265619 NRXN2Q9P2S2 1712 aa9□□□□□ -0.97
VAPB-201ENST00000265619 CCDC162PA2VCL2 907 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 CLOCKO15516 846 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 CFLARO15519 480 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 UBL4AP11441 157 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 CXCR2P25025 360 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 ADSLP30566 484 aaPredicted RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 YAP1P46937 504 aaKnown RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 RPL10AP62906 217 aaKnown RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 TXNL4AP83876 142 aaKnown RBP8.99□□□□□ -0.97
VAPB-201ENST00000265619 FLOT2Q14254 428 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 RAB39AQ14964 217 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 MORF4L2Q15014 288 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 ZBED5Q49AG3 693 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 ADCY4Q8NFM4 1077 aa8.99□□□□□ -0.97
VAPB-201ENST00000265619 DCAF4Q8WV16 495 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms