RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 NT5C3BQ969T7 300 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 TMA16Q96EY4 203 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 CCDC42Q96M95 316 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 PNKPQ96T60 521 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 ACOX2Q99424 681 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 CIPCQ9C0C6 399 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 ABCB8Q9NUT2 735 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 MPP6Q9NZW5 540 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 WDR35Q9P2L0 1181 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 PCSK1NQ9UHG2 260 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 BZW2Q9Y6E2 419 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 SPEGQ15772 3267 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 ANKRD62A6NC57 917 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 SIGLEC16A6NMB1 481 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 TMEM110-MUSTN1A8MSY1 372 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 WASH3PC4AMC7 463 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 K7EQS6 105 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 CNTN5O94779 1100 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 PENKP01210 267 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 APODP05090 189 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 CD70P32970 193 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 SCNN1AP37088 669 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 CXCR3P49682 368 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 AMPD2Q01433 879 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 SATB1Q01826 763 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 NNTQ13423 1086 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 EIF4EBP2Q13542 120 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 CDH18Q13634 790 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 AUHQ13825 339 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 SMTNL2Q2TAL5 461 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 FSCBQ5H9T9 825 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 EGFLAMQ63HQ2 1017 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 GRAMD4Q6IC98 578 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 PLEKHA7Q6IQ23 1121 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 FBXL22Q6P050 247 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 PHTF2Q8N3S3 785 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 ATP6V0D2Q8N8Y2 350 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 XPO6Q96QU8 1125 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 HHIPQ96QV1 700 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 ANP32EQ9BTT0 268 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 NUP85Q9BW27 656 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 ISCUQ9H1K1 167 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 OSGEPQ9NPF4 335 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 PARVAQ9NVD7 372 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 ANAPC7Q9UJX3 599 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 ZNF510Q9Y2H8 683 aa7.5□□□□□ -1.21
DEPDC1B-201ENST00000265036 SPTBN4Q9H254 2564 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 SPTBN2O15020 2390 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 FAM72CH0Y354 149 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 COL9A1P20849 921 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 GSCP56915 257 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 PPP2R5DQ14738 602 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 ASTE1Q2TB18 679 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 ALFQ53S48 1182 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 FAM72AQ5TYM5 149 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 TMEM215Q68D42 235 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 FAM72DQ6L9T8 149 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 FAM72BQ86X60 149 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 FAM217AQ8IXS0 508 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CPXM2Q8N436 756 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 ZNF513Q8N8E2 541 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 DTWD2Q8NBA8 298 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 NETO2Q8NC67 525 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 HJURPQ8NCD3 748 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 PRSS33Q8NF86 280 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CYB5D2Q8WUJ1 264 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 PEBP4Q96S96 227 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CHRDQ9H2X0 955 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CACNA2D2Q9NY47 1150 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 MARK1Q9P0L2 795 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CTTNBP2NLQ9P2B4 639 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 RAD54BQ9Y620 910 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 EML5Q05BV3 1969 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CEP250Q9BV73 2442 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 TYW5A2RUC4 315 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 NCAM2O15394 837 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 DRD1P21728 446 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 SSR1P43307 286 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 PTPN9P43378 593 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 ZNF143P52747 638 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 DMWDQ09019 674 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 LRRC32Q14392 662 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 ANGPT1Q15389 498 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 MPPE1Q53F39 396 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 KCNT1Q5JUK3 1230 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 SMYD5Q6GMV2 418 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 RWDD4Q6NW29 188 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CHPFQ8IZ52 775 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 ARFGAP1Q8N6T3 406 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 TXNDC5Q8NBS9 432 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 OR52K2Q8NGK3 314 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 ZNF564Q8TBZ8 553 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CTNNBL1Q8WYA6 563 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 PRMT1Q99873 361 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 DESI2Q9BSY9 194 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 CNPY3Q9BT09 278 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 GOLPH3Q9H4A6 298 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 GRPEL1Q9HAV7 217 aa7.49□□□□□ -1.21
DEPDC1B-201ENST00000265036 KLHL11Q9NVR0 708 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms