RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TYK2P29597 1187 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 ARL2P36404 184 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 ALDH3B2P48448 385 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 TXNL4AP83876 142 aaKnown RBP12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 FAM102AQ5T9C2 384 aaPredicted RBP12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 VWA5B1Q5TIE3 1220 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 SLC9A4Q6AI14 798 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 LRRC8BQ6P9F7 803 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 POTEHQ6S545 545 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 VSIG10LQ86VR7 867 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 RAVER2Q9HCJ3 691 aaKnown RBP12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 JPH1Q9HDC5 661 aaPredicted RBP12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 VPS45Q9NRW7 570 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 RRN3Q9NYV6 651 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 CYTH4Q9UIA0 394 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 ADAM28Q9UKQ2 775 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 WDR37Q9Y2I8 494 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 H6PDO95479 791 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 TOP3BO95985 862 aaKnown RBP12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 IDO1P14902 403 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 ASPAP45381 313 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 CD97P48960 835 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 SEMA5AQ13591 1074 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 SPIDRQ14159 915 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 RFTN1Q14699 578 aaPredicted RBP12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 PATL1Q86TB9 770 aaKnown RBP12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 CDAN1Q8IWY9 1227 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 HM13Q8TCT9 377 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 LPAR1Q92633 364 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 TMEM143Q96AN5 459 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 PEBP4Q96S96 227 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 OSBPL6Q9BZF3 934 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 ILKAPQ9H0C8 392 aaPredicted RBP12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 EFCAB1Q9HAE3 211 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 SLC38A10Q9HBR0 1119 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 MORF4L1Q9UBU8 362 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 MYRFQ9Y2G1 1151 aa12.71□□□□□ -0.38
CHMP2B-201ENST00000263780 TCP10L2B9ZVM9 353 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 HMGCRP04035 888 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ASNSP08243 561 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 PDGFRAP16234 1089 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 THOP1P52888 689 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ESRRGP62508 458 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ART3Q13508 389 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 PEX6Q13608 980 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 GRTP1Q5TC63 336 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 CASC4Q6P4E1 433 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ABHD15Q6UXT9 468 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 Q6ZNX1 250 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF534Q76KX8 674 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 AMIGO2Q86SJ2 522 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 MPP5Q8N3R9 675 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 CPSF7Q8N684 471 aaKnown RBP12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 BHLHE22Q8NFJ8 381 aaPredicted RBP12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ANKRD36BP1Q96IX9 119 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 VPS50Q96JG6 964 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 PKP2Q99959 881 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF670Q9BS34 389 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 TCHPQ9BT92 498 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 HACD3Q9P035 362 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 TJP2Q9UDY2 1190 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ITGB1BP2Q9UKP3 347 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ARHGEF37A1IGU5 675 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF701M0R085 212 aaPredicted RBP12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 NR3C2P08235 984 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 KCNA2P16389 499 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 PGAM1P18669 254 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 YY1P25490 414 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 NR2C2P49116 596 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 EFNA5P52803 228 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 ACTR2P61160 394 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 HACE1Q8IYU2 909 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 TDRD5Q8NAT2 981 aaKnown RBP12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 RXFP2Q8WXD0 754 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 EME1Q96AY2 570 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 TMEM216Q9P0N5 145 aa12.7□□□□□ -0.38
CHMP2B-201ENST00000263780 C2CD4BA6NLJ0 364 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 NOP56O00567 594 aaKnown RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 OGTO15294 1046 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 TADA2AO75478 443 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 XRCC1P18887 633 aaPredicted RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 SERPINB5P36952 375 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 GP5P40197 560 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 PRKAA2P54646 552 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 PRKG1Q13976 671 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 SLC9B1Q4ZJI4 515 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 DUS1LQ6P1R4 473 aaKnown RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 CCDC60Q8IWA6 550 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms