RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 APBA2Q99767 749 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 EBNA1BP2Q99848 306 aaKnown RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 GCOM2Q9BZD3 368 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 TUBGCP4Q9UGJ1 667 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 CORO1CQ9ULV4 474 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 MAFBQ9Y5Q3 323 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 H3BRB1 525 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 ABL2P42684 1182 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 NAGLUP54802 743 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 LRRC8EQ6NSJ5 796 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 DENND1AQ8TEH3 1009 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 GTF3C2Q8WUA4 911 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 ELMO2Q96JJ3 720 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 TUT1Q9H6E5 874 aaKnown RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 SYBUQ9NX95 663 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 KCNK4Q9NYG8 393 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 TP73O15350 636 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 SPOUT1Q5T280 376 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 PLEKHH3Q7Z736 793 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 CTU1Q7Z7A3 348 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 EME1Q96AY2 570 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 CDRT15Q96T59 188 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 SEMA6AQ9H2E6 1030 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 RUVBL2Q9Y230 463 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 COL22A1Q8NFW1 1626 aaPredicted RBP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 CHADO15335 359 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 SP100P23497 879 aaPredicted RBP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 OAZ1P54368 228 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 PLIN5Q00G26 463 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 CCDC15Q0P6D6 951 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 CCDC142Q17RM4 750 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 TDRPQ86YL5 185 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 CCDC185Q8N715 623 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 DIS3LQ8TF46 1054 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 ARHGAP26Q9UNA1 814 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 SMNDC1O75940 238 aaKnown RBP eCLIP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 CYP2C9P11712 490 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 TUBP50607 506 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 GNASQ5JWF2 1037 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 CYP2R1Q6VVX0 501 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 DNERQ8NFT8 737 aa16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 HBS1LQ9Y450 684 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-201ENST00000263666 PMM2O15305 246 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 PDK1Q15118 436 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 IRGCQ6NXR0 463 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 ASRGL1Q7L266 308 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 PCDH20Q8N6Y1 951 aaKnown RBP16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 RAET1EQ8TD07 263 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 COPS7BQ9H9Q2 264 aaPredicted RBP16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 EPS15L1Q9UBC2 864 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 PPM1HQ9ULR3 514 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 UTRNP46939 3433 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 NFASCO94856 1347 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 BPGMP07738 259 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 ARL13BQ3SXY8 428 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 LRRC23Q53EV4 343 aaPredicted RBP16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 ZBTB46Q86UZ6 589 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 PHF21BQ96EK2 531 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 SNX10Q9Y5X0 201 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 CILPO75339 1184 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 HMBSP08397 361 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 C15orf39Q6ZRI6 1047 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 FAM156AQ8NDB6 213 aa16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 FAF1Q9UNN5 650 aaPredicted RBP16.6■□□□□ 0.25
PDZRN3-201ENST00000263666 SMAPO00193 183 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 CSPG5O95196 566 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 ADORA2AP29274 412 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 PPIL2Q13356 520 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 MPP3Q13368 585 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 NRF1Q16656 503 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 ZC3H15Q8WU90 426 aaKnown RBP16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 PABPC5Q96DU9 382 aaKnown RBP16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 TCF7L2Q9NQB0 619 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 SLC7A8Q9UHI5 535 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 VANGL2Q9ULK5 521 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 SSX2IPQ9Y2D8 614 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 SERPINE1P05121 402 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 ITGA2BP08514 1039 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 AFAP1L2Q8N4X5 818 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 FAM193BQ96PV7 902 aaPredicted RBP16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 XPOTO43592 962 aaKnown RBP16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 GPD2P43304 727 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 LAMC2Q13753 1193 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 ARFGAP1Q8N6T3 406 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 NACA2Q9H009 215 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 ILKAPQ9H0C8 392 aaPredicted RBP16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 IRAK4Q9NWZ3 460 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 TMEM216Q9P0N5 145 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 SIX4Q9UIU6 781 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 RECQL4O94761 1208 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 SLC10A6Q3KNW5 377 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 RARS2Q5T160 578 aaKnown RBP16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 CERCAMQ5T4B2 595 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 ABI1Q8IZP0 508 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 KCNK16Q96T55 309 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 PIF1Q9H611 641 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 CAAP1Q9H8G2 361 aa16.59■□□□□ 0.25
PDZRN3-201ENST00000263666 GIPC1O14908 333 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms