RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 COCHO43405 550 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 F11P03951 625 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 C8AP07357 584 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 CLCN4P51793 760 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 RHBDF2Q6PJF5 856 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 BBOF1Q8ND07 529 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 BTN2A3PQ96KV6 586 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 RAD54BQ9Y620 910 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 ANAPC1Q9H1A4 1944 aa23.61■■□□□ 1.37
SMARCB1-201ENST00000263121 HACD1B0YJ81 288 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 CSPG5O95196 566 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 OAS1P00973 400 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 LRG1P02750 347 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 SRGAP2BP0DMP2 458 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 RBL1P28749 1068 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 IRS1P35568 1242 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 ERVK-21P61565 698 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 P3H1Q32P28 736 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 ZNF683Q8IZ20 524 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 MREGQ8N565 214 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 TBC1D31Q96DN5 1066 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 SLC12A6Q9UHW9 1150 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 YBX2Q9Y2T7 364 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 OBSL1O75147 1896 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 E9PAM4 449 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 DNALI1O14645 258 aaPredicted RBP23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 C1RP00736 705 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 RPL22P35268 128 aaKnown RBP23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 ITGA8P53708 1063 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 CAV1Q03135 178 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 GPS1Q13098 491 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 MTA1Q13330 715 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 MS4A13Q5J8X5 152 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 IZUMO3Q5VZ72 239 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 NUGGCQ68CJ6 796 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 PDZD4Q76G19 769 aaPredicted RBP23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 C14orf80Q86SX3 495 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 NPWQ8N729 165 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 ADAM7Q9H2U9 754 aa23.6■■□□□ 1.37
SMARCB1-201ENST00000263121 FGF10O15520 208 aaPredicted RBP23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 KCNN4O15554 427 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 LPXNO60711 386 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 HMBSP08397 361 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 PDK1Q15118 436 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 ACBD5Q5T8D3 534 aaPredicted RBP23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 MTERF4Q7Z6M4 381 aaKnown RBP23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 TMC8Q8IU68 726 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 MICAL1Q8TDZ2 1067 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 LRRC45Q96CN5 670 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 LRRC3Q9BY71 257 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 NACA2Q9H009 215 aa23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 MTRF1LQ9UGC7 380 aaKnown RBP23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 MTCL1Q9Y4B5 1905 aaKnown RBP23.59■■□□□ 1.37
SMARCB1-201ENST00000263121 C2orf78A6NCI8 922 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 SERPINB6P35237 376 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 HSPA9P38646 679 aaKnown RBP23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 NRLP54845 237 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 PRKD1Q15139 912 aaPredicted RBP23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 PABPC1LQ4VXU2 614 aaKnown RBP23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 HIBCHQ6NVY1 386 aaPredicted RBP23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 RWDD4Q6NW29 188 aaKnown RBP23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 RTL10Q7L3V2 364 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 CCDC33Q8N5R6 958 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 LRRN4Q8WUT4 740 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 TFB1MQ8WVM0 346 aaKnown RBP23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 PRMT1Q99873 361 aaKnown RBP23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 KLC2Q9H0B6 622 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 CATSPERBQ9H7T0 1116 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 ANAPC5Q9UJX4 755 aa23.58■■□□□ 1.37
SMARCB1-201ENST00000263121 H3BNC9 293 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 KCNQ1P51787 676 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 AUHQ13825 339 aaKnown RBP23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 PDE12Q6L8Q7 609 aaKnown RBP23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 TMC3Q7Z5M5 1100 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 TP53INP2Q8IXH6 220 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 TSEN2Q8NCE0 465 aaKnown RBP23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 TXLNGYQ9BZA5 131 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 RNF38Q9H0F5 515 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 PRDM12Q9H4Q4 367 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 VIPAS39Q9H9C1 493 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 TPX2Q9ULW0 747 aaKnown RBP23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 IGLV3-10A0A075B6K4 115 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 PPP1R12AO14974 1030 aaPredicted RBP23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 NCAM2O15394 837 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 VAV1P15498 845 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 PBX2P40425 430 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 COG7P83436 770 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 GPM6BQ13491 265 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 NETO2Q8NC67 525 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 PLD4Q96BZ4 506 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 LGMNQ99538 433 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 PPARGC1AQ9UBK2 798 aaKnown RBP23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 HPCAL4Q9UM19 191 aa23.57■■□□□ 1.36
SMARCB1-201ENST00000263121 WASH4PA8MWX3 477 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 NDC80O14777 642 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 PPFIA2O75334 1257 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 OLFM2O95897 454 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 GALNT2Q10471 571 aa23.56■■□□□ 1.36
SMARCB1-201ENST00000263121 RNASEH2BQ5TBB1 312 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 306.6 ms