RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 C1RP00736 705 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 C8AP07357 584 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 ZSCAN5DPP0CG00 497 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 SRGAP2BP0DMP2 458 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 ETS1P14921 441 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 GPS1Q13098 491 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 P3H1Q32P28 736 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 PABPC1LQ4VXU2 614 aaKnown RBP13.42□□□□□ -0.26
VAMP7-201ENST00000262640 IZUMO3Q5VZ72 239 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 FAM109BQ6ICB4 259 aaPredicted RBP13.42□□□□□ -0.26
VAMP7-201ENST00000262640 RTL10Q7L3V2 364 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 PRUNE1Q86TP1 453 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 CATSPERBQ9H7T0 1116 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 USP29Q9HBJ7 922 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 XPO7Q9UIA9 1087 aaKnown RBP13.42□□□□□ -0.26
VAMP7-201ENST00000262640 ANAPC5Q9UJX4 755 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 NEU3Q9UQ49 428 aa13.42□□□□□ -0.26
VAMP7-201ENST00000262640 DNALI1O14645 258 aaPredicted RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 NCAM2O15394 837 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 KCNN4O15554 427 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 COCHO43405 550 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 MAP3K6O95382 1288 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 RBL1P28749 1068 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 GGCXP38435 758 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 ITGA8P53708 1063 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 PIK3R6Q5UE93 754 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 PDE12Q6L8Q7 609 aaKnown RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 RWDD4Q6NW29 188 aaKnown RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 ELMOD1Q8N336 334 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 TFB1MQ8WVM0 346 aaKnown RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 VIPAS39Q9H9C1 493 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 E9PAM4 449 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 PPP1R12AO14974 1030 aaPredicted RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 GRM6O15303 877 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 SASH3O75995 380 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 HMBSP08397 361 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 RPL22P35268 128 aaKnown RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 ACTN2P35609 894 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 HSPA9P38646 679 aaKnown RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 CLCN4P51793 760 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 ERVK-21P61565 698 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 COG7P83436 770 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 FERMT1Q9BQL6 677 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 BRD8Q9H0E9 1235 aa13.41□□□□□ -0.26
VAMP7-201ENST00000262640 ZNF334Q9HCZ1 680 aaPredicted RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 TPX2Q9ULW0 747 aaKnown RBP13.41□□□□□ -0.26
VAMP7-201ENST00000262640 TP73O15350 636 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 OAS1P00973 400 aaKnown RBP13.4□□□□□ -0.26
VAMP7-201ENST00000262640 F11P03951 625 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
VAMP7-201ENST00000262640 MS4A13Q5J8X5 152 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 HIBCHQ6NVY1 386 aaPredicted RBP13.4□□□□□ -0.26
VAMP7-201ENST00000262640 RHBDF2Q6PJF5 856 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 LRRC31Q6UY01 552 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 C4orf22Q6V702 233 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 B4GALNT4Q76KP1 1039 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 SPRED2Q7Z698 418 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 PCGF5Q86SE9 256 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 PLD4Q96BZ4 506 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 TSPYL1Q9H0U9 437 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 IL21Q9HBE4 155 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 PAK5Q9P286 719 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 CLUHO75153 1309 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.4□□□□□ -0.26
VAMP7-201ENST00000262640 CSPG5O95196 566 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 MX2P20592 715 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 MORF4L2Q15014 288 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 ARTNQ5T4W7 220 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 HEATR6Q6AI08 1181 aaKnown RBP13.4□□□□□ -0.26
VAMP7-201ENST00000262640 TMC3Q7Z5M5 1100 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 C14orf80Q86SX3 495 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 TMEM150AQ86TG1 271 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 LZTR1Q8N653 840 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 FOXP3Q9BZS1 431 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 ADAM7Q9H2U9 754 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 ACBD3Q9H3P7 528 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 PPARGC1AQ9UBK2 798 aaKnown RBP13.4□□□□□ -0.26
VAMP7-201ENST00000262640 HPCAL4Q9UM19 191 aa13.4□□□□□ -0.26
VAMP7-201ENST00000262640 WASH4PA8MWX3 477 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 PPFIA2O75334 1257 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 HARS2P49590 506 aaKnown RBP13.39□□□□□ -0.27
VAMP7-201ENST00000262640 DHX9Q08211 1270 aaKnown RBP13.39□□□□□ -0.27
VAMP7-201ENST00000262640 GPM6BQ13491 265 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 AUHQ13825 339 aaKnown RBP13.39□□□□□ -0.27
VAMP7-201ENST00000262640 CAMK1Q14012 370 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 PPM1LQ5SGD2 360 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 COL13A1Q5TAT6 717 aaPredicted RBP13.39□□□□□ -0.27
VAMP7-201ENST00000262640 ZNF683Q8IZ20 524 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 NPWQ8N729 165 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 HTR3CQ8WXA8 447 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 PRDM12Q9H4Q4 367 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 DONSONQ9NYP3 566 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 SHOC2Q9UQ13 582 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 C2orf78A6NCI8 922 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 C5orf60A6NFR6 353 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 H3BNC9 293 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 SMAPO00193 183 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 GCATO75600 419 aa13.39□□□□□ -0.27
VAMP7-201ENST00000262640 STK10O94804 968 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms