RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CYBBP04839 570 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 RARAP10276 462 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 ADH5P11766 374 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 GJA4P35212 333 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 SSR1P43307 286 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 SGSHP51688 502 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 CA9Q16790 459 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 GAB4Q2WGN9 574 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 ANO4Q32M45 955 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 KCNT1Q5JUK3 1230 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 MPP7Q5T2T1 576 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 IER5LQ5T953 404 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 FAM72AQ5TYM5 149 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 FAM72DQ6L9T8 149 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 FAM72BQ86X60 149 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 REXO1L1PQ8IX06 675 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 PYROXD2Q8N2H3 581 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 KIAA1524Q8TCG1 905 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 DDI1Q8WTU0 396 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 TEKT4Q8WW24 435 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 CHFRQ96EP1 664 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 BBS2Q9BXC9 721 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 ZWILCHQ9H900 591 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 HEBP1Q9NRV9 189 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 GPATCH2LQ9NWQ4 482 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 PLK2Q9NYY3 685 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 WNT16Q9UBV4 365 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 HYOU1Q9Y4L1 999 aa17.18■□□□□ 0.34
CHCHD3-201ENST00000262570 BDP1A6H8Y1 2624 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 IGLV3-10A0A075B6K4 115 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 E9PAM4 449 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 NEDD8-MDP1E9PL57 170 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 TYRP14679 529 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 L1CAMP32004 1257 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 RPS24P62847 133 aaKnown RBP17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 SEMA3BQ13214 749 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 SMTNL2Q2TAL5 461 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 SLC44A4Q53GD3 710 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 MANEALQ5VSG8 457 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 RNF43Q68DV7 783 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 LRRC31Q6UY01 552 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 POLNQ7Z5Q5 900 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 HJURPQ8NCD3 748 aaPredicted RBP17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 BHMTQ93088 406 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 IGSF8Q969P0 613 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 CAPN6Q9Y6Q1 641 aa17.17■□□□□ 0.34
CHCHD3-201ENST00000262570 DRGXA6NNA5 263 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 SPOPO43791 374 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 SRGAP2O75044 1071 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 PALMO75781 387 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 LRIG2O94898 1065 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 KRT7P08729 469 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 GLULP15104 373 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 HOXD9P28356 352 aaPredicted RBP17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 SOX9P48436 509 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 DPYSL2Q16555 572 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 ATP13A4Q4VNC1 1196 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 RABGAP1LQ5R372 815 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 LRRC38Q5VT99 294 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 ETFBKMTQ8IXQ9 262 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 CFAP52Q8N1V2 620 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 RPRD1AQ96P16 312 aaPredicted RBP17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 DHX35Q9H5Z1 703 aaKnown RBP17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 C8orf33Q9H7E9 229 aaPredicted RBP17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 PPARGC1AQ9UBK2 798 aaKnown RBP17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 PIAS3Q9Y6X2 628 aa17.16■□□□□ 0.34
CHCHD3-201ENST00000262570 TYW5A2RUC4 315 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 CACNG3O60359 315 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 TBL1XO60907 577 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 CTHP32929 405 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 ZXDAP98168 799 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 AMPD2Q01433 879 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 RALGPS2Q86X27 583 aaPredicted RBP17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 RHOT1Q8IXI2 618 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 SYCE1Q8N0S2 351 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 HSPH1Q92598 858 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 CD101Q93033 1021 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 TRMT1Q9NXH9 659 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 FBXO10Q9UK96 956 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 NEU3Q9UQ49 428 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 F5P12259 2224 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 COL4A2P08572 1712 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 MYOFQ9NZM1 2061 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 SHISA7A6NL88 538 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 SPECC1L-ADORA2AF8WAN1 911 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 CREB3O43889 395 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 OPRD1P41143 372 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 IRAK1P51617 712 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 TTC39BQ5VTQ0 682 aaPredicted RBP17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 NT5DC3Q86UY8 548 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 C12orf40Q86WS4 652 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 NAT16Q8N8M0 369 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 MSANTD3Q96H12 275 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 XPO6Q96QU8 1125 aaKnown RBP17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 KCTD15Q96SI1 283 aaPredicted RBP17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 EPAS1Q99814 870 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 STIM2Q9P246 746 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 CLEC4EQ9ULY5 219 aa17.15■□□□□ 0.34
CHCHD3-201ENST00000262570 A0A1B0GVM2 712 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms