RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 MRPL45Q9BRJ2 306 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 FAM49AQ9H0Q0 323 aaPredicted RBP14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 FZD8Q9H461 694 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 CPSF2Q9P2I0 782 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 HES2Q9Y543 173 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 GOLGA8QA0A0J9YX86 632 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 GOLGA8OA6NCC3 632 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 ZBTB42B2RXF5 422 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 GOLGA8NF8WBI6 632 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 DCXO43602 365 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 GOT1P17174 413 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 PRKCHP24723 683 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 LBRQ14739 615 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 ACAP1Q15027 740 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 EML3Q32P44 896 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 RAPH1Q70E73 1250 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 TTC30AQ86WT1 665 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 DEFB107AQ8IZN7 70 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 PTPRHQ9HD43 1115 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 AP4E1Q9UPM8 1137 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 TRIP11Q15643 1979 aa14.89□□□□□ -0.03
SFSWAP-201ENST00000261674 NEMP1O14524 444 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 PAPSS1O43252 624 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 NPTXRO95502 500 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 C1QAP02745 245 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 LYNP07948 512 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 INSRRP14616 1297 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 ETS2P15036 469 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 PGGT1BP53609 377 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 HDAC4P56524 1084 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 MBTD1Q05BQ5 628 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 C17orf99Q6UX52 265 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 CDKL3Q8IVW4 592 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 CDKL2Q92772 493 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 AZIN2Q96A70 460 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 GOLGA8TH3BQL2 631 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 KCNK1O00180 336 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 MAGEC1O60732 1142 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 ARF4P18085 180 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 CRHR1P34998 444 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 ACTR3P61158 418 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 RBBP5Q15291 538 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 TRIP10Q15642 601 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 TEX44Q53QW1 395 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 CELF3Q5SZQ8 465 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 TAPT1Q6NXT6 567 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 NET1Q7Z628 596 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 COLGALT1Q8NBJ5 622 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 OR6J1Q8NGC5 347 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 ECSITQ9BQ95 431 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 CCDC106Q9BWC9 280 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 EBF3Q9H4W6 596 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 TNFSF13BQ9Y275 285 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 ASB14A6NK59 587 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 KLF11O14901 512 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 SERPINA6P08185 405 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 TGM2P21980 687 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 COPAP53621 1224 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 RBP5P82980 135 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 SREBF2Q12772 1141 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 PDE1CQ14123 709 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 OLFML2BQ68BL8 750 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 HPS6Q86YV9 775 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 APOL2Q9BQE5 337 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 XPNPEP3Q9NQH7 507 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 RNF186Q9NXI6 227 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 ZNF180Q9UJW8 692 aa14.88□□□□□ -0.03
SFSWAP-201ENST00000261674 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 CFLARO15519 480 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 ENDOD1O94919 500 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 CCDC130P13994 396 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 RAP1GDS1P52306 607 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 SLC6A3Q01959 620 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 TNFAIP2Q03169 654 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 CDC16Q13042 620 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 FOXB2Q5VYV0 432 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 CCDC185Q8N715 623 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 RNF148Q8N7C7 305 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 MPHOSPH6Q99547 160 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 TMEM216Q9P0N5 145 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 RPS6KL1Q9Y6S9 549 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 SIN3BO75182 1162 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 DGKIO75912 1065 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 ALDOAP04075 364 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 PFKMP08237 780 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 EDNRBP24530 442 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 EFHC1Q5JVL4 640 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 LCLAT1Q6UWP7 414 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 PID1Q7Z2X4 250 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 OXCT2Q9BYC2 517 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 DPEP3Q9H4B8 488 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 PNPLA8Q9NP80 782 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 PCDHA11Q9Y5I1 949 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 BCLAF3A2AJT9 711 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 AIM2O14862 343 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 FESP07332 822 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 GABRB2P47870 512 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 MAP2K5Q13163 448 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 GRB14Q14449 540 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 TEDDM1Q5T9Z0 273 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms