RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.34■□□□□ 0.21
LMNB1-201ENST00000261366 INO80B-WBP1J3KQ70 363 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 XPO1O14980 1071 aaKnown RBP16.34■□□□□ 0.21
LMNB1-201ENST00000261366 ITGB3P05106 788 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 EPHA3P29320 983 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 ARL2P36404 184 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 CDKL1Q00532 357 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 MYBPC1Q00872 1141 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 SLC10A2Q12908 348 aaPredicted RBP16.34■□□□□ 0.21
LMNB1-201ENST00000261366 TMEM198Q66K66 360 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 MAP7D3Q8IWC1 876 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 SCUBE3Q8IX30 993 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 PLD6Q8N2A8 252 aaKnown RBP16.34■□□□□ 0.21
LMNB1-201ENST00000261366 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 INO80BQ9C086 356 aaPredicted RBP16.34■□□□□ 0.21
LMNB1-201ENST00000261366 PCDH18Q9HCL0 1135 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
LMNB1-201ENST00000261366 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
LMNB1-201ENST00000261366 NFICP08651 508 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 HOXC6P09630 235 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 MTTPP55157 894 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 HPCAP84074 193 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 EEF1DP3Q658K8 133 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 KCNT2Q6UVM3 1135 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 NAPRTQ6XQN6 538 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 TRIM50Q86XT4 487 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 ANKRD36BP1Q96IX9 119 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 CNPY3Q9BT09 278 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 B3GNT5Q9BYG0 378 aa16.34■□□□□ 0.21
LMNB1-201ENST00000261366 UNKQ9C0B0 810 aaKnown RBP16.34■□□□□ 0.21
LMNB1-201ENST00000261366 GLRA3O75311 464 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 USP12O75317 370 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 PHKA2P46019 1235 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 BAG6P46379 1132 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 HDAC4P56524 1084 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 BHLHE22Q8NFJ8 381 aaPredicted RBP16.33■□□□□ 0.21
LMNB1-201ENST00000261366 LGMNQ99538 433 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 PTTG2Q9NZH5 202 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 COPG2Q9UBF2 871 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 SORCS3Q9UPU3 1222 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 HES2Q9Y543 173 aa16.33■□□□□ 0.21
LMNB1-201ENST00000261366 OGTO15294 1046 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 CSPG5O95196 566 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 PRKCBP05771 671 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 STILQ15468 1287 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 Q3C1V9 767 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 OGFRL1Q5TC84 451 aaPredicted RBP16.33■□□□□ 0.2
LMNB1-201ENST00000261366 FKBP1CQ5VVH2 108 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 LILRA2Q8N149 483 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 GRIN3AQ8TCU5 1115 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 TRAPPC12Q8WVT3 735 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 KCNK16Q96T55 309 aa16.33■□□□□ 0.2
LMNB1-201ENST00000261366 MRPL4Q9BYD3 311 aaKnown RBP16.33■□□□□ 0.2
LMNB1-201ENST00000261366 TDRKHQ9Y2W6 561 aaKnown RBP16.33■□□□□ 0.2
LMNB1-201ENST00000261366 SYNJ2BP-COX16A0A087WUM0 186 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 C2CD4BA6NLJ0 364 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 GOLGA8TH3BQL2 631 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 FAM189A1O60320 539 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 MSCO60682 206 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 CHRNGP07510 517 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 CPA3P15088 417 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 CYP2F1P24903 491 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 GPD2P43304 727 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 SERPINB9P50453 376 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 IRF9Q00978 393 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 MS4A2Q01362 244 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 ENPEPQ07075 957 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 CCDC14Q49A88 953 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 RARS2Q5T160 578 aaKnown RBP16.32■□□□□ 0.2
LMNB1-201ENST00000261366 SAMD7Q7Z3H4 446 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 RCN3Q96D15 328 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 TMA16Q96EY4 203 aaKnown RBP16.32■□□□□ 0.2
LMNB1-201ENST00000261366 TMEM165Q9HC07 324 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 COX16Q9P0S2 106 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 PSMD13Q9UNM6 376 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 A0A0J9YVX5 310 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 ZNF195O14628 629 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 PIGRP01833 764 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 PRKCGP05129 697 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 CDK4P11802 303 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 MAP1SQ66K74 1059 aaPredicted RBP16.32■□□□□ 0.2
LMNB1-201ENST00000261366 TMIGD2Q96BF3 282 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 HSPBAP1Q96EW2 488 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 AGAP3Q96P47 875 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 PKP2Q99959 881 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 LHX5Q9H2C1 402 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 KIAA1217Q5T5P2 1943 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 FBXO21O94952 628 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 HNRNPCP07910 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
LMNB1-201ENST00000261366 MPSTP25325 297 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 CNTN2Q02246 1040 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 HEATR6Q6AI08 1181 aaKnown RBP16.32■□□□□ 0.2
LMNB1-201ENST00000261366 MTMR14Q8NCE2 650 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 RAB3IL1Q8TBN0 382 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 TMEM176AQ96HP8 235 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 CATSPER2Q96P56 530 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 LPIN3Q9BQK8 851 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms