RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PAEPP09466 180 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 GNA15P30679 374 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 EFNA5P52803 228 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 MDH1BQ5I0G3 518 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 LSMEM2Q8N112 164 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 MREGQ8N565 214 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 C1orf54Q8WWF1 131 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 CDK5RAP3Q96JB5 506 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ACBD6Q9BR61 282 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 HIPK3Q9H422 1215 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TREX1Q9NSU2 369 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 PRKDCP78527 4128 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 H3BMM5 538 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 C1SP09871 688 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 HARSP12081 509 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ATF2P15336 505 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 PTPN9P43378 593 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TFAMQ00059 246 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 SREBF2Q12772 1141 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TMEM132DQ14C87 1099 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 PAFAH1B3Q15102 231 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TRIP4Q15650 581 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 DUOXA2Q1HG44 320 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 GNPTABQ3T906 1256 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TMEM184AQ6ZMB5 413 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 CHPFQ8IZ52 775 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 APCDD1Q8J025 514 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 C12orf76Q8N812 135 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 LRRC45Q96CN5 670 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 MRGPRX2Q96LB1 330 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ZIM3Q96PE6 472 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ACOX2Q99424 681 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 FAM83CQ9BQN1 747 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ULBP1Q9BZM6 244 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 HCRTR1O43613 425 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 CA3P07451 260 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 OPRD1P41143 372 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 HK3P52790 923 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 GPR17Q13304 367 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 GBP6Q6ZN66 633 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TMTC1Q8IUR5 882 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TOP6BLQ8N6T0 577 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 GTF3C2Q8WUA4 911 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ISL2Q96A47 359 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 KIF12Q96FN5 646 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TRIM39Q9HCM9 518 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ALDH1A2O94788 518 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 PLAURQ03405 335 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 RAPGEF1Q13905 1077 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ASIC2Q16515 512 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF569Q5MCW4 686 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TEX35Q5T0J7 233 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 TAF2Q6P1X5 1199 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 HERC6Q8IVU3 1022 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 RSAD2Q8WXG1 361 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 SERAC1Q96JX3 654 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 IL12RB2Q99665 862 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 PUF60Q9UHX1 559 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 HCN4Q9Y3Q4 1203 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 CCL27Q9Y4X3 112 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 A0A1W2PQH9 124 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 WASH3PC4AMC7 463 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 MAGEB2O15479 319 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 CETN2P41208 172 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 MAP3K7CLP57077 242 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 PLCB2Q00722 1185 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 STXBP4Q6ZWJ1 553 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 PIANPQ8IYJ0 282 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 ALLCQ8N6M5 410 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 COLGALT1Q8NBJ5 622 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 USP13Q92995 863 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 BIRC8Q96P09 236 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 FTHL17Q9BXU8 183 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF385DQ9H6B1 395 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 PRM3Q9NNZ6 103 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 CHST12Q9NRB3 414 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 MPP6Q9NZW5 540 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 MARCH4Q9P2E8 410 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 CGNQ9P2M7 1197 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 AKT3Q9Y243 479 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 H3BMH7 237 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 XPO1O14980 1071 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 IRAK2O43187 625 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 SORBS2O94875 1100 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 FAM13AO94988 1023 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 NPR3P17342 541 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 ACVR1Q04771 509 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 C11orf96Q7Z7L8 435 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 CENPLQ8N0S6 344 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 DEFB106AQ8N104 65 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 MRPL43Q8N983 215 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 ANKRD49Q8WVL7 239 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 RAB34Q9BZG1 259 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 RSAD1Q9HA92 442 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 HMX1Q9NP08 348 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 DDX43Q9NXZ2 648 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 ADAM28Q9UKQ2 775 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 GIT1Q9Y2X7 761 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 A0A1W2PQF6 199 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 K7EQS6 105 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms