RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ABCG1P45844 678 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 PDK4Q16654 411 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZNF284Q2VY69 593 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 DNAJC14Q6Y2X3 702 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 AKAP14Q86UN6 197 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 SATL1Q86VE3 508 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM228AQ86W67 206 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 ERO1BQ86YB8 467 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZCCHC9Q8N567 271 aaKnown RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 SERHL2Q9H4I8 314 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 SMARCAD1Q9H4L7 1026 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 A1CFQ9NQ94 594 aaKnown RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 SERHLQ9NQF3 203 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 NDUFAF1Q9Y375 327 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 CAPN8A6NHC0 703 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 F8W810 466 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 SHOX2O60902 331 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZC3H11AO75152 810 aaKnown RBP eCLIP9.96□□□□□ -0.817e-6■■■■■ 33.7
CTDSPL2-201ENST00000260327 ICAM1P05362 532 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 COX4I1P13073 169 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 TCF7P36402 384 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 TALDO1P37837 337 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 HIRAP54198 1017 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 ABATP80404 500 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 LACTB2Q53H82 288 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 OTOP1Q7RTM1 612 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM131BQ86XD5 332 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 CCNJLQ8IV13 435 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 TMC2Q8TDI7 906 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 RSPH1Q8WYR4 309 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 RNFT2Q96EX2 444 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 INPP4AQ96PE3 977 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 FRMD8P1Q9BZ68 369 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 NUAK2Q9H093 628 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 PIM2Q9P1W9 311 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 TJP2Q9UDY2 1190 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 POLIQ9UNA4 740 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLC30A1Q9Y6M5 507 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 PNMA8CA0A1B0GUJ8 204 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 GOLGA8TH3BQL2 631 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 GH1P01241 217 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 TPH1P17752 444 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 GARTP22102 1010 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 PIK3R1P27986 724 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 SKIV2L2P42285 1042 aaKnown RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 RECQLP46063 649 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 ADAM17P78536 824 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 PPP3CAQ08209 521 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 PRKAA1Q13131 559 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 IER5Q5VY09 327 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 EGFL6Q8IUX8 553 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 C8orf59Q8N0T1 100 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 EIF1ADQ8N9N8 165 aaKnown RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 SPATA20Q8TB22 786 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 FAM151AQ8WW52 585 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 FAM120BQ96EK7 910 aaKnown RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 ERI2A8K979 691 aaKnown RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 MAP3K13O43283 966 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 C6orf222P0C671 652 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZNF37AP17032 561 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 LRPAP1P30533 357 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 DUPD1Q68J44 220 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 BLOC1S5Q8TDH9 187 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 BORCS5Q969J3 196 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 VPS33AQ96AX1 596 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 GPAMQ9HCL2 828 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 DPP3Q9NY33 737 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 WWOXQ9NZC7 414 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 KLK14Q9P0G3 267 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 SPASTQ9UBP0 616 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 ATP6V1HQ9UI12 483 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 ITM2BQ9Y287 266 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 TPRKBQ9Y3C4 175 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 F8VP50 259 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 CCNFP41002 786 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 PLK1P53350 603 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 UCMAQ8WVF2 138 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 CGRRF1Q99675 332 aa9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZNF624Q9P2J8 865 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-201ENST00000260327 OGTO15294 1046 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 PDE9AO76083 593 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 IL12AP29459 219 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 MMP13P45452 471 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 PARP6Q2NL67 630 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 KLHL12Q53G59 568 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 NEK10Q6ZWH5 1172 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 FITM2Q8N6M3 262 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 VGLL2Q8N8G2 317 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 OSBPL10Q9BXB5 764 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 POLG2Q9UHN1 485 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 EFCAB10A6NFE3 127 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 TCF3P15923 654 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 PRKCIP41743 596 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 RPS7P62081 194 aaKnown RBP9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 MGAT5Q09328 741 aa9.95□□□□□ -0.82
CTDSPL2-201ENST00000260327 RIPK1Q13546 671 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms