RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 NDNQ99608 321 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 PSMC3IPQ9P2W1 217 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-201ENST00000258607 SLC39A10Q9ULF5 831 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 ATP11BQ9Y2G3 1177 aa9.37□□□□□ -0.91
CKAP2-201ENST00000258607 DOCK6Q96HP0 2047 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 TRIOBPQ9H2D6 2365 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 A0A1W2PQH9 124 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 TMEM88BA6NKF7 163 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 MEI4A8MW99 385 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 NUDT17P0C025 328 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 TYK2P29597 1187 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 MMP13P45452 471 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 TSPY1Q01534 308 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 CHI3L2Q15782 390 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 LRRC36Q1X8D7 754 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 ANO4Q32M45 955 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 ZMIZ2Q8NF64 920 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 KATNAL1Q9BW62 490 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 DUSP16Q9BY84 665 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 PPARGC1AQ9UBK2 798 aaKnown RBP9.36□□□□□ -0.91
CKAP2-201ENST00000258607 TCRBV5S1A1TA0A578 114 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 PMM2O15305 246 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 SUN1O94901 812 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 ACRP10323 421 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 NCF2P19878 526 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-201ENST00000258607 SCTRP47872 440 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 LPIN1Q14693 890 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 STAT4Q14765 748 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 MORF4L2Q15014 288 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 GEN1Q17RS7 908 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 MORN1Q5T089 497 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 RAP1GAP2Q684P5 730 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 RHBDF2Q6PJF5 856 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 UNC5AQ6ZN44 842 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 TRPM8Q7Z2W7 1104 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 ZNF598Q86UK7 904 aaKnown RBP9.36□□□□□ -0.91
CKAP2-201ENST00000258607 RASSF3Q86WH2 238 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 TLCD1Q96CP7 247 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 CYTH2Q99418 400 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 SARS2Q9NP81 518 aaKnown RBP9.36□□□□□ -0.91
CKAP2-201ENST00000258607 NT5MQ9NPB1 228 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 IARS2Q9NSE4 1012 aaKnown RBP9.36□□□□□ -0.91
CKAP2-201ENST00000258607 C20orf96Q9NUD7 363 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-201ENST00000258607 SHOC2Q9UQ13 582 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 LCTP09848 1927 aa9.36□□□□□ -0.91
CKAP2-201ENST00000258607 OR51F1A6NGY5 319 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ARHGAP42A6NI28 874 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 MATKP42679 507 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 SLC5A3P53794 718 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 USP46P62068 366 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 TAP1Q03518 808 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ARHGAP17Q68EM7 881 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 EP400NLQ6ZTU2 488 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 FITM2Q8N6M3 262 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 RNF148Q8N7C7 305 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 BBOF1Q8ND07 529 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 CMASQ8NFW8 434 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 PPP1R10Q96QC0 940 aaKnown RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 FSD1LQ9BXM9 530 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 NMUR1Q9HB89 426 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 POPDC2Q9HBU9 364 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 GKN1Q9NS71 199 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 RABGEF1Q9UJ41 708 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 MTF2Q9Y483 593 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 COMMD10Q9Y6G5 202 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ZNF646O15015 1829 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 DUSP11O75319 330 aaKnown RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ENO1P06733 434 aaKnown RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ATP5DP30049 168 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 CLUL1Q15846 466 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 DEFB115Q30KQ5 88 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 POM121L1PQ3SYA9 428 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 HABP4Q5JVS0 413 aaKnown RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 NCBP2-AS2Q69YL0 99 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 CYP4V2Q6ZWL3 525 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 TRABD2AQ86V40 505 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ZNF567Q8N184 647 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 EFHBQ8N7U6 833 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 DCBLD1Q8N8Z6 715 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ACVR1CQ8NER5 493 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 PPM1EQ8WY54 764 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 MYLIPQ8WY64 445 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 CASP10Q92851 521 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 RPRD1AQ96P16 312 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 TXLNGYQ9BZA5 131 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ZMYND8Q9ULU4 1186 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 PTPRFP10586 1907 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 PIRO00625 290 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 GPR182O15218 404 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 DIAPH2O60879 1101 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 SHOX2O60902 331 aaPredicted RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 STK10O94804 968 aaKnown RBP9.35□□□□□ -0.91
CKAP2-201ENST00000258607 VAPBO95292 243 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 INHAP05111 366 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ITGAVP06756 1048 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 ARSAP15289 507 aa9.35□□□□□ -0.91
CKAP2-201ENST00000258607 TUBP50607 506 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms