RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SNX10Q9Y5X0 201 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 HELZP42694 1942 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 SLC12A8A0AV02 714 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 H3BNC9 293 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 H7C0C1 242 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 TP73O15350 636 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 COCHO43405 550 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 LPXNO60711 386 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 MOCS2O96007 188 aaPredicted RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 OAS1P00973 400 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 LRG1P02750 347 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 F11P03951 625 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 FAM153BP0C7A2 387 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ITIH2P19823 946 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 EPHB2P29323 1055 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 GGCXP38435 758 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ADCY8P40145 1251 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ATP5OP48047 213 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 GDF10P55107 478 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 RBM10P98175 930 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 TRIP13Q15645 432 aaPredicted RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 FAM153CQ494X1 144 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 PABPC1LQ4VXU2 614 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 PDE12Q6L8Q7 609 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 DARS2Q6PI48 645 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 ZDHHC24Q6UX98 284 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 UNC45BQ8IWX7 931 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ATP6V0D2Q8N8Y2 350 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 RSAD2Q8WXG1 361 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 SNF8Q96H20 258 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 GDF15Q99988 308 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 FUT8Q9BYC5 575 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 NEUROG2Q9H2A3 272 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 C10orf88Q9H8K7 445 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 USP29Q9HBJ7 922 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ZNF334Q9HCZ1 680 aaPredicted RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 FAM153AQ9UHL3 310 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 SLC12A6Q9UHW9 1150 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 XPO7Q9UIA9 1087 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 YBX2Q9Y2T7 364 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 RAD54BQ9Y620 910 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 HS3ST4Q9Y661 456 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 NYNRINQ9P2P1 1898 aaKnown RBP9.75□□□□□ -0.85
NIP7-202ENST00000254941 CFAP69A5D8W1 941 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 HACD1B0YJ81 288 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 FGF10O15520 208 aaPredicted RBP9.75□□□□□ -0.85
NIP7-202ENST00000254941 MFSD11O43934 449 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 MAP3K6O95382 1288 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 IFNB1P01574 187 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 SRGAP2BP0DMP2 458 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 ETS1P14921 441 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 IRS1P35568 1242 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 PLTPP55058 493 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 COG7P83436 770 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 CALCOCO2Q13137 446 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 SLC45A4Q5BKX6 768 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 MS4A13Q5J8X5 152 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 PIK3R6Q5UE93 754 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 NUGGCQ68CJ6 796 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 PDZD4Q76G19 769 aaPredicted RBP9.75□□□□□ -0.85
NIP7-202ENST00000254941 FAM71DQ8N9W8 422 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 FBXO25Q8TCJ0 367 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 ART4Q93070 314 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 RTP4Q96DX8 246 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 FMO2Q99518 471 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 LRRC3Q9BY71 257 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 NACA2Q9H009 215 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 C5orf42Q9H799 3197 aa9.75□□□□□ -0.85
NIP7-202ENST00000254941 IGLV3-10A0A075B6K4 115 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 C2orf78A6NCI8 922 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 E9PAM4 449 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 NCAM2O15394 837 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 ATP8B1O43520 1251 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 CSPG5O95196 566 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 ZSCAN5DPP0CG00 497 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 SERPINB6P35237 376 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PBX2P40425 430 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 VPS41P49754 854 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 GPM6BQ13491 265 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PDK1Q15118 436 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 GAREM2Q75VX8 874 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 HDXQ7Z353 690 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PRUNE1Q86TP1 453 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 TMC8Q8IU68 726 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 CDKL3Q8IVW4 592 aaPredicted RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 ZNF683Q8IZ20 524 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 ELMOD1Q8N336 334 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 BBOF1Q8ND07 529 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 TFB1MQ8WVM0 346 aaKnown RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 TBC1D31Q96DN5 1066 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 GDAP1L1Q96MZ0 367 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 QKIQ96PU8 341 aaKnown RBP eCLIP9.74□□□□□ -0.85
NIP7-202ENST00000254941 PBX4Q9BYU1 374 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 RNF38Q9H0F5 515 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 CATSPERBQ9H7T0 1116 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 MAP2K7O14733 419 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms