RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TRIM13O60858 407 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 USP1O94782 785 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 NPR3P17342 541 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 FUT11Q495W5 492 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 PANX3Q96QZ0 392 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 APBA2Q99767 749 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 CCT7Q99832 543 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 POLR1EQ9GZS1 481 aaKnown RBP19.39■□□□□ 0.69
PTPRE-201ENST00000254667 IMPAD1Q9NX62 359 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 BTNL10A8MVZ5 291 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 OR56A5P0C7T3 313 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 FAM71AQ8IYT1 594 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 MARCH2Q9P0N8 246 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 LYPLA2O95372 231 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ZNF143P52747 638 aaPredicted RBP19.38■□□□□ 0.69
PTPRE-201ENST00000254667 BMT2Q1RMZ1 405 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ZNF438Q7Z4V0 828 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ASB2Q96Q27 587 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 RNF208Q9H0X6 261 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 HAO1Q9UJM8 370 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 GNG14A0A1W2PPG7 69 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 EIF4E1BA6NMX2 242 aaKnown RBP19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ADRB2P07550 413 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 RRM2P31350 389 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 RPL9P32969 192 aaKnown RBP19.38■□□□□ 0.69
PTPRE-201ENST00000254667 MMP13P45452 471 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 SCNN1GP51170 649 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 BCL2L1Q07817 233 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 CCDC149Q6ZUS6 474 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 GPR142Q7Z601 462 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ZFYVE19Q96K21 471 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 TSPAN3O60637 253 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ATP5C1P36542 298 aaKnown RBP19.38■□□□□ 0.69
PTPRE-201ENST00000254667 SKIV2L2P42285 1042 aaKnown RBP19.38■□□□□ 0.69
PTPRE-201ENST00000254667 CASP5P51878 434 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 CAPSQ13938 189 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 CCDC85BQ15834 202 aaPredicted RBP19.38■□□□□ 0.69
PTPRE-201ENST00000254667 CYP4Z1Q86W10 505 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 FBXO39Q8N4B4 442 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ETNPPLQ8TBG4 499 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 HSD17B14Q9BPX1 270 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 CDT1Q9H211 546 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 SMPD4Q9NXE4 827 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 TMCC3Q9ULS5 477 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 V9GYQ6 96 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 FCGR1AP12314 374 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 MLH1P40692 756 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 DPYSL3Q14195 570 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 GLT6D1Q7Z4J2 308 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ATXN2LQ8WWM7 1075 aaKnown RBP19.38■□□□□ 0.69
PTPRE-201ENST00000254667 NOD2Q9HC29 1040 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 PCDH8O95206 1070 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 TPH1P17752 444 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 DLG4P78352 724 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 DSG1Q02413 1049 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 SLC45A4Q5BKX6 768 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 ZNF470Q6ECI4 717 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 KIAA0319LQ8IZA0 1049 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 STK40Q8N2I9 435 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 THAP1Q9NVV9 213 aa19.38■□□□□ 0.69
PTPRE-201ENST00000254667 SLIT3O75094 1523 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 TISP43B9A030 160 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 GSNP06396 782 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 MAMLD1Q13495 774 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 ADAM32Q8TC27 787 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 INPP5DQ92835 1189 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 COPS5Q92905 334 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 PNMA8BQ9ULN7 279 aaPredicted RBP19.37■□□□□ 0.69
PTPRE-201ENST00000254667 SF3B1O75533 1304 aaKnown RBP eCLIP19.37■□□□□ 0.69
PTPRE-201ENST00000254667 WEE1P30291 646 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 CAPZA2P47755 286 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 PIK3CGP48736 1102 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 NR6A1Q15406 480 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 TMEM154Q6P9G4 183 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 TTC33Q6PID6 262 aaPredicted RBP19.37■□□□□ 0.69
PTPRE-201ENST00000254667 LRRC49Q8IUZ0 686 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 FAM136AQ96C01 138 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 FHDC1Q9C0D6 1143 aaPredicted RBP19.37■□□□□ 0.69
PTPRE-201ENST00000254667 TCF7L2Q9NQB0 619 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 F8VP50 259 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 NR5A2O00482 541 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 CHADO15335 359 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 VPS4BO75351 444 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 GUCA1CO95843 209 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 ERBB2P04626 1255 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 SGCGQ13326 291 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 ARMC12Q5T9G4 340 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 WSCD1Q658N2 575 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 LRRC8DQ7L1W4 858 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 MTDHQ86UE4 582 aaKnown RBP19.37■□□□□ 0.69
PTPRE-201ENST00000254667 CEP41Q9BYV8 373 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 PDGFDQ9GZP0 370 aaPredicted RBP19.37■□□□□ 0.69
PTPRE-201ENST00000254667 CASZ1Q86V15 1759 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 A0A096LPK6 155 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 KCNK1O00180 336 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 WDR47O94967 919 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 NFICP08651 508 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 PCNAP12004 261 aa19.37■□□□□ 0.69
PTPRE-201ENST00000254667 CRYBB1P53674 252 aaPredicted RBP19.37■□□□□ 0.69
PTPRE-201ENST00000254667 PRMT9Q6P2P2 845 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms