RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 GOLGA6L7A0A1B0GV03 622 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 A0A1B0GVM2 712 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 A0A1W2PQJ5 194 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 TCRBV21S2A2A0A5A6 115 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 TCAF2A6NFQ2 919 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 GOLGA8SH3BPF8 625 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 HRO43593 1189 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 TIMM44O43615 452 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 LUC7L3O95232 432 aaKnown RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 TACR2P21452 398 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 RDXP35241 583 aaKnown RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 PBX1P40424 430 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 PRKCIP41743 596 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 PXNP49023 591 aaPredicted RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 PTP4A2Q12974 167 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 NME3Q13232 169 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 RABGAP1LQ5R372 815 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 RAP1GAP2Q684P5 730 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 PRR23BQ6ZRT6 265 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 CEP68Q76N32 757 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 CCDC117Q8IWD4 279 aaPredicted RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 OLIG1Q8TAK6 271 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 FIBINQ8TAL6 211 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 RNF34Q969K3 372 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 PRMT1Q99873 361 aaKnown RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 SYT11Q9BT88 431 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 NUP58Q9BVL2 599 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 CIPCQ9C0C6 399 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 PIGVQ9NUD9 493 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 ABCB8Q9NUT2 735 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 ELOVL2Q9NXB9 296 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 ARHGEF38Q9NXL2 777 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 CALCOCO1Q9P1Z2 691 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 THAP10Q9P2Z0 257 aaPredicted RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 NCDNQ9UBB6 729 aa13.22□□□□□ -0.29
VPREB3-201ENST00000248948 XPO7Q9UIA9 1087 aaKnown RBP13.22□□□□□ -0.29
VPREB3-201ENST00000248948 CFAP54Q96N23 3096 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 ITIH6Q6UXX5 1313 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 SYNJ2BP-COX16A0A087WUM0 186 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 A0A1W2PQF6 199 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 LRP3O75074 770 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 TPM3P06753 285 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 HOXC13P31276 330 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 CXCR3P49682 368 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 UBASH3AP57075 661 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 RPS24P62847 133 aaKnown RBP13.21□□□□□ -0.29
VPREB3-201ENST00000248948 DEUP1Q05D60 604 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 SRSF5Q13243 272 aaKnown RBP13.21□□□□□ -0.29
VPREB3-201ENST00000248948 STARD3Q14849 445 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 ASIC2Q16515 512 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 C2CD6Q53TS8 623 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 TMEM215Q68D42 235 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 TRNP1Q6NT89 227 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 CHST9Q7L1S5 443 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 IRF2BP2Q7Z5L9 587 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 LGI2Q8N0V4 545 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.29
VPREB3-201ENST00000248948 WFDC5Q8TCV5 224 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 LOXL4Q96JB6 756 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 ZC3H10Q96K80 434 aaKnown RBP13.21□□□□□ -0.29
VPREB3-201ENST00000248948 SPACA7Q96KW9 195 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 PCDHB18PQ96TA0 734 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 ACOX2Q99424 681 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 TBCBQ99426 244 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 HINFPQ9BQA5 517 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 SEPT11Q9NVA2 429 aaKnown RBP13.21□□□□□ -0.29
VPREB3-201ENST00000248948 CACNA2D2Q9NY47 1150 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 ADAM22Q9P0K1 906 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 COX16Q9P0S2 106 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
VPREB3-201ENST00000248948 STON1Q9Y6Q2 735 aa13.21□□□□□ -0.29
VPREB3-201ENST00000248948 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
VPREB3-201ENST00000248948 PAGE1O75459 146 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 ASLP04424 464 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 ATP5BP06576 529 aaKnown RBP13.2□□□□□ -0.3
VPREB3-201ENST00000248948 RETP07949 1114 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 GABRG2P18507 467 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 SDC4P31431 198 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 CD70P32970 193 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 IL12RB1P42701 662 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 PTPN9P43378 593 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 OXCT1P55809 520 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 RNASE9P60153 205 aaKnown RBP13.2□□□□□ -0.3
VPREB3-201ENST00000248948 SLC12A1Q13621 1099 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
VPREB3-201ENST00000248948 ZNF234Q14588 700 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 FUT11Q495W5 492 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 C5orf22Q49AR2 442 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 USP39Q53GS9 565 aaKnown RBP13.2□□□□□ -0.3
VPREB3-201ENST00000248948 SFMBT2Q5VUG0 894 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 ADIPOR2Q86V24 386 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 FAM160A2Q8N612 972 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms