RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 IFT81Q8WYA0 676 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 LARP4BQ92615 738 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 SGCDQ92629 289 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 UTP4Q969X6 686 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 NMD3Q96D46 503 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 ERLEC1Q96DZ1 483 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PAGE5Q96GU1 130 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 SCLYQ96I15 445 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 KCTD15Q96SI1 283 aaPredicted RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 HGH1Q9BTY7 390 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 POLR3FQ9H1D9 316 aaPredicted RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 BHMT2Q9H2M3 363 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PDZD7Q9H5P4 517 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 TRIM10Q9UDY6 481 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 VPS9D1Q9Y2B5 631 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ATP11BQ9Y2G3 1177 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PCDHB2Q9Y5E7 798 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PATJQ8NI35 1801 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 TTC3P53804 2025 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PVALEFA0A1B0GWK0 134 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 RSPH10B2B2RC85 870 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 H0Y3Z8 333 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 FRS3O43559 492 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 EFCAB14O75071 495 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PDE5AO76074 875 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 DDHD2O94830 711 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ARHGEF15O94989 841 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 OR6B1O95007 311 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 RSPH10BP0C881 870 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 CALB2P22676 271 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ANXA13P27216 316 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 AXLP30530 894 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 S100A5P33763 92 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ETV3P41162 512 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 NPTX2P47972 431 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 POLD2P49005 469 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 TMED10P49755 219 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 SH3BGRP55822 239 aaPredicted RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 ATP11AP98196 1134 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 CD300CQ08708 224 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 TRIM14Q14142 442 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 STK11Q15831 433 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 FAM153CQ494X1 144 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 C9orf50Q5SZB4 431 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 CCDC122Q5T0U0 273 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 KRT79Q5XKE5 535 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 SIGIRRQ6IA17 410 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 LIMS2Q7Z4I7 341 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 TAB3Q8N5C8 712 aaPredicted RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 DTX3Q8N9I9 347 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 SLC35G2Q8TBE7 412 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 FNDC8Q8TC99 324 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PIGOQ8TEQ8 1089 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 GLG1Q92896 1179 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 CEP170P1Q96L14 293 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 FBXL18Q96ME1 805 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PYM1Q9BRP8 204 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 LRRC1Q9BTT6 524 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 KCTD10Q9H3F6 313 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 RNPEPL1Q9HAU8 725 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PARVGQ9HBI0 331 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 GPRC5CQ9NQ84 441 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 ARHGEF3Q9NR81 526 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 SAMSN1Q9NSI8 373 aaKnown RBP3.78□□□□□ -1.8
UFM1-201ENST00000239878 TMEM39AQ9NV64 488 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 TBCCD1Q9NVR7 557 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 NMRK1Q9NWW6 199 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 FAM153AQ9UHL3 310 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 TET1Q8NFU7 2136 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 MYH11P35749 1972 aa3.78□□□□□ -1.8
UFM1-201ENST00000239878 PABPN1LA6NDY0 278 aaKnown RBP3.77□□□□□ -1.81
UFM1-201ENST00000239878 SMIM23A6NLE4 172 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 FAM47E-STBD1D6RA91 191 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 SOX1O00570 391 aaPredicted RBP3.77□□□□□ -1.81
UFM1-201ENST00000239878 FSCN2O14926 492 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 EIF3DO15371 548 aaKnown RBP eCLIP3.77□□□□□ -1.81
UFM1-201ENST00000239878 NCK2O43639 380 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 SEC24DO94855 1032 aaPredicted RBP3.77□□□□□ -1.81
UFM1-201ENST00000239878 VTNP04004 478 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 PCNAP12004 261 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 BMP6P22004 513 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 PPP1R2P41236 205 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 CASP5P51878 434 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 SUZ12Q15022 739 aaKnown RBP3.77□□□□□ -1.81
UFM1-201ENST00000239878 MUM1Q2TAK8 710 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 BOLA3Q53S33 107 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 PPP1R2P3Q6NXS1 205 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 CD300LGQ6UXG3 332 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 GK5Q6ZS86 529 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 TRPM8Q7Z2W7 1104 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 ZC3H18Q86VM9 953 aaKnown RBP3.77□□□□□ -1.81
UFM1-201ENST00000239878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.77□□□□□ -1.81
UFM1-201ENST00000239878 AHI1Q8N157 1196 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 LRRC71Q8N4P6 559 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 TMEM199Q8N511 208 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 KIAA0895Q8NCT3 520 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 CCDC197Q8NCU1 140 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 C1orf162Q8NEQ5 155 aaPredicted RBP3.77□□□□□ -1.81
UFM1-201ENST00000239878 ZNF507Q8TCN5 953 aa3.77□□□□□ -1.81
UFM1-201ENST00000239878 TRPC4APQ8TEL6 797 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms