RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 FZD10Q9ULW2 581 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 SHOC2Q9UQ13 582 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 ESYT3A0FGR9 886 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 BCLAF3A2AJT9 711 aaKnown RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 ZSCAN5CA6NGD5 496 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 YJEFN3A6XGL0 299 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 E7ENQ6 273 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 M0QYT0 321 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 PIK3R2O00459 728 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 IGLV3-25P01717 112 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 USP17L7P0C7H9 530 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 NCAM1P13591 858 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 KRT10P13645 584 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 ADRA1BP35368 520 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 RPL21P46778 160 aaKnown RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 KPNA1P52294 538 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 SLC5A3P53794 718 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 OTUD4Q01804 1114 aaKnown RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 NRG1Q02297 640 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 ZNF33AQ06730 810 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 PPP2R5DQ14738 602 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 BSPRYQ5W0U4 402 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 KAZNQ674X7 775 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 CCDC149Q6ZUS6 474 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 TRMT10CQ7L0Y3 403 aaKnown RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 BHLHA9Q7RTU4 235 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 TMC3Q7Z5M5 1100 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 TADA2BQ86TJ2 420 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 CDKL3Q8IVW4 592 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 SERPINB11Q96P15 392 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 HERPUD2Q9BSE4 406 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 OSBPL2Q9H1P3 480 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 PLEKHA4Q9H4M7 779 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 RETREG1Q9H6L5 497 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 TMLHEQ9NVH6 421 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 FBXW11Q9UKB1 542 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 DNPEPQ9ULA0 475 aa13.65□□□□□ -0.22
SLIRP-201ENST00000238688 R3HDM2Q9Y2K5 976 aaKnown RBP13.65□□□□□ -0.22
SLIRP-201ENST00000238688 MTSS1O43312 755 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 SASH3O75995 380 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 KRT14P02533 472 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 FYNP06241 537 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 RARGP13631 454 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 IL4RP24394 825 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 IVDP26440 423 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 SERPINB6P35237 376 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 ADCY8P40145 1251 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 EIF3EP60228 445 aaKnown RBP13.64□□□□□ -0.23
SLIRP-201ENST00000238688 YWHAGP61981 247 aaKnown RBP eCLIP13.64□□□□□ -0.23
SLIRP-201ENST00000238688 ROR1Q01973 937 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 NHLH1Q02575 133 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 PSMD5Q16401 504 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 BTBD8Q5XKL5 378 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 OTOP3Q7RTS5 596 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 CEP57Q86XR8 500 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 UBALD2Q8IYN6 164 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 IQCKQ8N0W5 287 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 PLD5Q8N7P1 536 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 PDZD8Q8NEN9 1154 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 RSAD2Q8WXG1 361 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 ATG4AQ8WYN0 398 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 SMG7Q92540 1137 aaKnown RBP13.64□□□□□ -0.23
SLIRP-201ENST00000238688 HAPLN3Q96S86 360 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 MYADMQ96S97 322 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 EPAS1Q99814 870 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 TXLNGYQ9BZA5 131 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 DHX35Q9H5Z1 703 aaKnown RBP13.64□□□□□ -0.23
SLIRP-201ENST00000238688 FAM204AQ9H8W3 233 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 TMEM30AQ9NV96 361 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 KLHL11Q9NVR0 708 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 ABI2Q9NYB9 513 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-201ENST00000238688 CLUHO75153 1309 aa13.64□□□□□ -0.23
SLIRP-201ENST00000238688 EIF3HO15372 352 aaKnown RBP eCLIP13.63□□□□□ -0.23
SLIRP-201ENST00000238688 NUDT17P0C025 328 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 RBP3P10745 1247 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 CPB1P15086 417 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 CYP2F1P24903 491 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 AVPR2P30518 371 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 KCNJ1P48048 391 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 PPP3CCP48454 512 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 PLTPP55058 493 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 TCF15Q12870 199 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 SEMA3BQ13214 749 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 EIF4EBP2Q13542 120 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-201ENST00000238688 P3H1Q32P28 736 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 OTUD1Q5VV17 481 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-201ENST00000238688 RHBDF2Q6PJF5 856 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 ZDHHC24Q6UX98 284 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 PPP1R21Q6ZMI0 780 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 DENND5BQ6ZUT9 1274 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 GPRIN1Q7Z2K8 1008 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 ANKS1BQ7Z6G8 1248 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 LRRC49Q8IUZ0 686 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 SLC7A14Q8TBB6 771 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 FBXO25Q8TCJ0 367 aa13.63□□□□□ -0.23
SLIRP-201ENST00000238688 RNF139Q8WU17 664 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms