RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 FBXL6Q8N531 539 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 CCNYQ8ND76 341 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 EXD1Q8NHP7 514 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 FAM122AQ96E09 287 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 TCEAL4Q96EI5 215 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 RPP25Q9BUL9 199 aaKnown RBP8.96□□□□□ -0.97
VPS4B-201ENST00000238497 LRRC19Q9H756 370 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 CDH7Q9ULB5 785 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 YIPF1Q9Y548 306 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 NFS1Q9Y697 457 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 FAM186AA6NE01 2351 aa8.96□□□□□ -0.97
VPS4B-201ENST00000238497 OR6C75A6NL08 312 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 CAPN9O14815 690 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 PPFIA2O75334 1257 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 RARGP13631 454 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 SDC4P31431 198 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 STX2P32856 288 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 GNL1P36915 607 aaPredicted RBP8.96□□□□□ -0.98
VPS4B-201ENST00000238497 VEPH1Q14D04 833 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 C6orf118Q5T5N4 469 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 NUGGCQ68CJ6 796 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 TPGS2Q68CL5 300 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 PARM1Q6UWI2 310 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 KDM7AQ6ZMT4 941 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 FAM183BPQ6ZVS7 135 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 UBALD2Q8IYN6 164 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 TTC9BQ8N6N2 239 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 C3orf20Q8ND61 904 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 MYCBPAPQ8TBZ2 947 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 PYROXD1Q8WU10 500 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 P3H4Q92791 437 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 EPN3Q9H201 632 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 KIF9Q9HAQ2 790 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 IGSF9Q9P2J2 1179 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 STRIP2Q9ULQ0 834 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 CHMP2BQ9UQN3 213 aa8.96□□□□□ -0.98
VPS4B-201ENST00000238497 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.96□□□□□ -0.98
VPS4B-201ENST00000238497 CCDC78A2IDD5 438 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 MCF2LO15068 1137 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 PSTPIP1O43586 416 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 AVILO75366 819 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 TFE3P19532 575 aaPredicted RBP8.95□□□□□ -0.98
VPS4B-201ENST00000238497 HADHBP55084 474 aaKnown RBP8.95□□□□□ -0.98
VPS4B-201ENST00000238497 CLDN10P78369 228 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 PTP4A2Q12974 167 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 CCNG2Q16589 344 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 FAM133BQ5BKY9 247 aaKnown RBP8.95□□□□□ -0.98
VPS4B-201ENST00000238497 SDHAF4Q5VUM1 108 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 CCDC121Q6ZUS5 278 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 UNC45BQ8IWX7 931 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 MREGQ8N565 214 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 SLC2A14Q8TDB8 520 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 FAM172AQ8WUF8 416 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 CFAP36Q96G28 342 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 C12orf65Q9H3J6 166 aaKnown RBP8.95□□□□□ -0.98
VPS4B-201ENST00000238497 ATXN3LQ9H3M9 355 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 DSEQ9UL01 958 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 DERAQ9Y315 318 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 TMEM120BA0PK00 339 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 M0QZQ0 153 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 PIRO00625 290 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 KCNN4O15554 427 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 CEBPBP17676 345 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 RDXP35241 583 aaKnown RBP8.95□□□□□ -0.98
VPS4B-201ENST00000238497 PNPLA4P41247 253 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 EIF3BP55884 814 aaKnown RBP8.95□□□□□ -0.98
VPS4B-201ENST00000238497 DCAF6Q58WW2 860 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 LRIG3Q6UXM1 1119 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 SLC44A3Q8N4M1 653 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 STKLD1Q8NE28 680 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 OR10T2Q8NGX3 314 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 FGF14Q92915 247 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 ART4Q93070 314 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 RNF34Q969K3 372 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 RUNDC3BQ96NL0 473 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 TMPRSS4Q9NRS4 437 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 ASNSD1Q9NWL6 643 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 DDX43Q9NXZ2 648 aaKnown RBP8.95□□□□□ -0.98
VPS4B-201ENST00000238497 NINJ2Q9NZG7 142 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 IKBKGQ9Y6K9 419 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 A0A1W2PRU2 124 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 CILPO75339 1184 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 MTA2O94776 668 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 OAZ2O95190 189 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 APRTP07741 180 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 KRT7P08729 469 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 DESP17661 470 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 TYMPP19971 482 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 VCPP55072 806 aaKnown RBP8.95□□□□□ -0.98
VPS4B-201ENST00000238497 IRX4P78413 519 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 SLC5A9Q2M3M2 681 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 XYLT1Q86Y38 959 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 NPAS3Q8IXF0 933 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 TCEAL8Q8IYN2 117 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 KATNAL2Q8IYT4 538 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 CYP4X1Q8N118 509 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 FAF2Q96CS3 445 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 RAB6BQ9NRW1 208 aa8.95□□□□□ -0.98
VPS4B-201ENST00000238497 NKIRAS1Q9NYS0 192 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms