RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ZSCAN32Q9NX65 697 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 NCDNQ9UBB6 729 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 ADAMTS1Q9UHI8 967 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 RABGEF1Q9UJ41 708 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 TMEM59LQ9UK28 342 aa11.7□□□□□ -0.54
SF3B6-201ENST00000233468 TPRP12270 2363 aaKnown RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 SYNJ2BP-COX16A0A087WUM0 186 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 TMCO5BA8MYB1 307 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 KCNU1A8MYU2 1149 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 DDX3XO00571 662 aaKnown RBP eCLIP11.69□□□□□ -0.546e-8■■□□□ 12.9
SF3B6-201ENST00000233468 CACNG3O60359 315 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 MFAP3LO75121 409 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 MOCS2O96007 188 aaPredicted RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 CHRNB1P11230 501 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 TGM1P22735 817 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 HOXC13P31276 330 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 RDXP35241 583 aaKnown RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 PTPN9P43378 593 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 TNFRSF4P43489 277 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 ZNF75DP51815 510 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 ARID5BQ14865 1188 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 LPAL2Q16609 132 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 C2CD6Q53TS8 623 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 TTC39BQ5VTQ0 682 aaPredicted RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 GRAMD4Q6IC98 578 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 TXNDC11Q6PKC3 985 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 GAS2L3Q86XJ1 694 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 HJURPQ8NCD3 748 aaPredicted RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 NT5C3BQ969T7 300 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 WBP2Q969T9 261 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 KCTD12Q96CX2 325 aaKnown RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 CCDC42Q96M95 316 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 NCAPGQ9BPX3 1015 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 CHRDQ9H2X0 955 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 PRMT8Q9NR22 394 aaPredicted RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 ARHGEF4Q9NR80 690 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 ABHD10Q9NUJ1 306 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 DNAJC17Q9NVM6 304 aaKnown RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 COX16Q9P0S2 106 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 SMG5Q9UPR3 1016 aaKnown RBP11.69□□□□□ -0.54
SF3B6-201ENST00000233468 PCDHGA2Q9Y5H1 932 aa11.69□□□□□ -0.54
SF3B6-201ENST00000233468 ZNF638Q14966 1978 aaKnown RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 TBC1D3BA6NDS4 549 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 C2CD4BA6NLJ0 364 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 BHMG1C9JSJ3 638 aaPredicted RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 F5H5T6 163 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 AKR1B10O60218 316 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 TULP3O75386 442 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 KAT7O95251 611 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 PENKP01210 267 aaPredicted RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 TDGF1P13385 188 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 GPD1P21695 349 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 FLT3P36888 993 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 OPRD1P41143 372 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 DGKGP49619 791 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 CXCR3P49682 368 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 CCR3P51677 355 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 OXCT1P55809 520 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 EIF4EBP2Q13542 120 aaPredicted RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 CCINQ13939 588 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 HSF5Q4G112 596 aaPredicted RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 RABGAP1LQ5R372 815 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 FYB2Q5VWT5 728 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 E4F1Q66K89 784 aaPredicted RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 ALKBH5Q6P6C2 394 aaKnown RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 LRRC31Q6UY01 552 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 STRADAQ7RTN6 431 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 TRMT11Q7Z4G4 463 aaKnown RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 CHSY1Q86X52 802 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 ETFBKMTQ8IXQ9 262 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 NAT16Q8N8M0 369 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 RXFP2Q8WXD0 754 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 ACDQ96AP0 544 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 CHFRQ96EP1 664 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 PPP1R9BQ96SB3 815 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 ISCUQ9H1K1 167 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 EPC1Q9H2F5 836 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 PARD6AQ9NPB6 346 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 DENND4CQ5VZ89 1909 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 NUP210Q8TEM1 1887 aaPredicted RBP11.68□□□□□ -0.54
SF3B6-201ENST00000233468 EPG5Q9HCE0 2579 aa11.68□□□□□ -0.54
SF3B6-201ENST00000233468 A0A0A0MRY4 1105 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 NPC1O15118 1278 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 TIMM44O43615 452 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 ENDOD1O94919 500 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 RRM1P23921 792 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 ZNF143P52747 638 aaPredicted RBP11.67□□□□□ -0.54
SF3B6-201ENST00000233468 ATXN1P54253 815 aaKnown RBP11.67□□□□□ -0.54
SF3B6-201ENST00000233468 ADKP55263 362 aaKnown RBP11.67□□□□□ -0.54
SF3B6-201ENST00000233468 MRPS21P82921 87 aaKnown RBP11.67□□□□□ -0.54
SF3B6-201ENST00000233468 TBX2Q13207 712 aaPredicted RBP11.67□□□□□ -0.54
SF3B6-201ENST00000233468 GAS6Q14393 721 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 SLC18A3Q16572 532 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 MS4A13Q5J8X5 152 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 CCDC122Q5T0U0 273 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 PIK3R6Q5UE93 754 aa11.67□□□□□ -0.54
SF3B6-201ENST00000233468 PLEKHA7Q6IQ23 1121 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms