RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SPATA31A5Q5VU36 1347 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 SPATA31A7Q8IWB4 1347 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 E7ESA3 106 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 SLITRK3O94933 977 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 KCNH1O95259 989 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 SGPL1O95470 568 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 IL4RP24394 825 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 MAPK4P31152 587 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 GALK2Q01415 458 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 GAD2Q05329 585 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 DRICH1Q6PGQ1 229 aaPredicted RBP13.34□□□□□ -0.27
MSH2-201ENST00000233146 ARCQ7LC44 396 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 HERC6Q8IVU3 1022 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 COLGALT2Q8IYK4 626 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 DCLK2Q8N568 766 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 UBR7Q8N806 425 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 OR13F1Q8NGS4 319 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 ATP13A3Q9H7F0 1226 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
MSH2-201ENST00000233146 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.34□□□□□ -0.27
MSH2-201ENST00000233146 DNAJC28Q9NX36 388 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 USP17L12C9JPN9 530 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 USP17L21D6R901 530 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 ENPP3O14638 875 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 AURKAO14965 403 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 TSHRP16473 764 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 MYF6P23409 242 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 NAMPTP43490 491 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 SLC12A3P55017 1021 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 PRAMEP78395 509 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 CEACAM7Q14002 265 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 FAM182AQ5T1J6 154 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.34□□□□□ -0.274e-7■■■■■ 35.4
MSH2-201ENST00000233146 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 BNC2Q6ZN30 1099 aaPredicted RBP13.34□□□□□ -0.27
MSH2-201ENST00000233146 IDO2Q6ZQW0 420 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 KCTD8Q6ZWB6 473 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 PALM2Q8IXS6 379 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 SPARTQ8N0X7 666 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 REXO1Q8N1G1 1221 aaKnown RBP13.34□□□□□ -0.27
MSH2-201ENST00000233146 BEND7Q8N7W2 519 aaPredicted RBP13.34□□□□□ -0.27
MSH2-201ENST00000233146 PSKH2Q96QS6 385 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 CPNE5Q9HCH3 593 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 ZNF304Q9HCX3 659 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 ANAPC7Q9UJX3 599 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 TCAF1Q9Y4C2 921 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 TESMINQ9Y4I5 508 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 SNCAIPQ9Y6H5 919 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 SNTNA6NMZ2 147 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 ACOT8O14734 319 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 KRT5P13647 590 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 DLG2Q15700 870 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 C6orf10Q5SRN2 563 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 ZCCHC23Q6ZST2 131 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 SLC22A16Q86VW1 577 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 ZC3H15Q8WU90 426 aaKnown RBP13.34□□□□□ -0.27
MSH2-201ENST00000233146 MMP19Q99542 508 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 RAD21L1Q9H4I0 556 aa13.34□□□□□ -0.27
MSH2-201ENST00000233146 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
MSH2-201ENST00000233146 UBE2TQ9NPD8 197 aaPredicted RBP13.34□□□□□ -0.27
MSH2-201ENST00000233146 POLR1CO15160 346 aaPredicted RBP13.33□□□□□ -0.28
MSH2-201ENST00000233146 TGFB1I1O43294 461 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 SERPINB2P05120 415 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 INHBAP08476 426 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 GNAO1P09471 354 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 ITIH1P19827 911 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 LEPRP48357 1165 aaKnown RBP13.33□□□□□ -0.28
MSH2-201ENST00000233146 OCA2Q04671 838 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 GADL1Q6ZQY3 521 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 CCDC60Q8IWA6 550 aaPredicted RBP13.33□□□□□ -0.28
MSH2-201ENST00000233146 TTC9Q92623 222 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 VTI1AQ96AJ9 217 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 MAGEE1Q9HCI5 957 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 ENPP5Q9UJA9 477 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 MAST2Q6P0Q8 1798 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 NCF2P19878 526 aaPredicted RBP13.33□□□□□ -0.28
MSH2-201ENST00000233146 SERPINB1P30740 379 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 MAPK10P53779 464 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 MYL7Q01449 175 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 KLF10Q13118 480 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 INSCQ1MX18 579 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 SLFN13Q68D06 897 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 OTOP3Q7RTS5 596 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 RHPN2Q8IUC4 686 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 ARMC8Q8IUR7 673 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 CCDC28AQ8IWP9 274 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 HAS1Q92839 578 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 CELF1Q92879 486 aaKnown RBP13.33□□□□□ -0.28
MSH2-201ENST00000233146 STMN3Q9NZ72 180 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 DSEQ9UL01 958 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 PCM1Q15154 2024 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 FADS2P1A8MWK0 482 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 DCXO43602 365 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 BMP3P12645 472 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 PKLRP30613 574 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 RAD23AP54725 363 aa13.33□□□□□ -0.28
MSH2-201ENST00000233146 FMO1Q01740 532 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms