RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 OFCC1Q8IZS5 231 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 CCDC106Q9BWC9 280 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 TRPC7Q9HCX4 862 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 RUVBL2Q9Y230 463 aaKnown RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 LSM1O15116 133 aaKnown RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 TPD52L2O43399 206 aaKnown RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 ZBTB11O95625 1053 aaPredicted RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 CLIC3O95833 236 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 SPRP35270 261 aaPredicted RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 ZIK1Q3SY52 487 aaPredicted RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 SCUBE3Q8IX30 993 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 C4orf19Q8IY42 314 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 CPXM1Q96SM3 734 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 MTG1Q9BT17 334 aaPredicted RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 NDEL1Q9GZM8 345 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 IARS2Q9NSE4 1012 aaKnown RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 PCDHGB4Q9UN71 923 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 PCDHGB5Q9Y5G0 923 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 TAF1P21675 1872 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 SDR42E2A6NKP2 422 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 GNGT2O14610 69 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 GRIA3P42263 894 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 JAG1P78504 1218 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 PLCL1Q15111 1095 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 HHIPL2Q6UWX4 724 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 MFSD14AQ96MC6 490 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 CCDC28BQ9BUN5 200 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 SSU72Q9NP77 194 aaKnown RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 C6orf203Q9P0P8 240 aaPredicted RBP14.9□□□□□ -0.02
PRDM4-201ENST00000228437 COL20A1Q9P218 1284 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 EGFL7Q9UHF1 273 aa14.9□□□□□ -0.02
PRDM4-201ENST00000228437 TRIM13O60858 407 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 ITGB3P05106 788 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 POLBP06746 335 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 CHRNGP07510 517 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 NR1D2Q14995 579 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 C6orf183Q5T699 404 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 SNRNP48Q6IEG0 339 aaKnown RBP14.89□□□□□ -0.03
PRDM4-201ENST00000228437 OGFOD2Q6N063 350 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 GK5Q6ZS86 529 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 HEATR4Q86WZ0 1026 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 COLGALT1Q8NBJ5 622 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 VPS50Q96JG6 964 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 MAML3Q96JK9 1138 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 ZNF302Q9NR11 478 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 ANKEF1Q9NU02 776 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 TJP1Q07157 1748 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 A0A1B0GTW7 788 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 TFAP2AP05549 437 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 TGM2P21980 687 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 KYAT3Q6YP21 454 aaKnown RBP14.89□□□□□ -0.03
PRDM4-201ENST00000228437 CHST15Q7LFX5 561 aaPredicted RBP14.89□□□□□ -0.03
PRDM4-201ENST00000228437 SEPHS2Q99611 448 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 BEGAINQ9BUH8 593 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 ITGA11Q9UKX5 1188 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 PARNO95453 639 aaKnown RBP14.89□□□□□ -0.03
PRDM4-201ENST00000228437 HSPA13P48723 471 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 TBCELQ5QJ74 424 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 EGFLAMQ63HQ2 1017 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 AMIGO3Q86WK7 504 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 RBM12BQ8IXT5 1001 aaKnown RBP14.89□□□□□ -0.03
PRDM4-201ENST00000228437 LARGE2Q8N3Y3 721 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 TFB1MQ8WVM0 346 aaKnown RBP14.89□□□□□ -0.03
PRDM4-201ENST00000228437 CGRRF1Q99675 332 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 APBA2Q99767 749 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 CHST12Q9NRB3 414 aa14.89□□□□□ -0.03
PRDM4-201ENST00000228437 MYO18AQ92614 2054 aaKnown RBP14.88□□□□□ -0.03
PRDM4-201ENST00000228437 CCNE2O96020 404 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 MAPTP10636 758 aaKnown RBP14.88□□□□□ -0.03
PRDM4-201ENST00000228437 IL10P22301 178 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 CYP2F1P24903 491 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 YAP1P46937 504 aaKnown RBP14.88□□□□□ -0.03
PRDM4-201ENST00000228437 WNT7BP56706 349 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 LSM3P62310 102 aaKnown RBP14.88□□□□□ -0.03
PRDM4-201ENST00000228437 ITKQ08881 620 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 PTP4A2Q12974 167 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 SLC39A4Q6P5W5 647 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 KCTD17Q8N5Z5 321 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 SYTL5Q8TDW5 730 aaPredicted RBP14.88□□□□□ -0.03
PRDM4-201ENST00000228437 WNK4Q96J92 1243 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 BTBD9Q96Q07 612 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 LGMNQ99538 433 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 EBNA1BP2Q99848 306 aaKnown RBP14.88□□□□□ -0.03
PRDM4-201ENST00000228437 TIMMDC1Q9NPL8 285 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 NRBP2Q9NSY0 501 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 UBAP1Q9NZ09 502 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 FEM1BQ9UK73 627 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 TRIM17Q9Y577 477 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 ATRNL1Q5VV63 1379 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 CLOCKO15516 846 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 SLC4A1P02730 911 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 ETV4P43268 484 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 GBE1Q04446 702 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 BNIP3Q12983 259 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 RAB6CQ53S08 254 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 IL23RQ5VWK5 629 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 DDIASQ8IXT1 998 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 RAB6CQ9H0N0 254 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 CCDC68Q9H2F9 335 aa14.88□□□□□ -0.03
PRDM4-201ENST00000228437 EURLQ9NYK6 297 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms