RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 CLCN3P51790 818 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 SLC6A3Q01959 620 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 MSLNQ13421 630 aaPredicted RBP17.97■□□□□ 0.47
PRPF19-201ENST00000227524 LPCAT4Q643R3 524 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 PMF1Q6P1K2 205 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 ST13P4Q8IZP2 240 aaPredicted RBP17.97■□□□□ 0.47
PRPF19-201ENST00000227524 C12orf29Q8N999 325 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 PPP4R1Q8TF05 950 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 CENPKQ9BS16 269 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 SPATA16Q9BXB7 569 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 VCX3BQ9H321 246 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 FAM96AQ9H5X1 160 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 CDH22Q9UJ99 828 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 KIAA1257Q9ULG3 409 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 TBC1D30Q9Y2I9 924 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 SF3B1O75533 1304 aaKnown RBP eCLIP17.97■□□□□ 0.472e-6■■■■■ 126.8
PRPF19-201ENST00000227524 PROCP04070 461 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 PRKCGP05129 697 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 ALOX15P16050 662 aaPredicted RBP17.97■□□□□ 0.47
PRPF19-201ENST00000227524 CCNA1P78396 465 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 LRRC36Q1X8D7 754 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 CFAP157Q5JU67 520 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 RASIP1Q5U651 963 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 PDPK2PQ6A1A2 396 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 KCNT2Q6UVM3 1135 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 C10orf107Q8IVU9 208 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 NCSTNQ92542 709 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 NT5C1AQ9BXI3 368 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 KLHL4Q9C0H6 718 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 DCDC2Q9UHG0 476 aa17.97■□□□□ 0.47
PRPF19-201ENST00000227524 TXNP10599 105 aaKnown RBP17.96■□□□□ 0.47
PRPF19-201ENST00000227524 PIM1P11309 404 aaPredicted RBP17.96■□□□□ 0.47
PRPF19-201ENST00000227524 MYL4P12829 197 aa17.96■□□□□ 0.47
PRPF19-201ENST00000227524 TFE3P19532 575 aaPredicted RBP17.96■□□□□ 0.47
PRPF19-201ENST00000227524 ARRB2P32121 409 aa17.96■□□□□ 0.47
PRPF19-201ENST00000227524 CRADDP78560 199 aa17.96■□□□□ 0.47
PRPF19-201ENST00000227524 HEATR6Q6AI08 1181 aaKnown RBP17.96■□□□□ 0.47
PRPF19-201ENST00000227524 TAPT1Q6NXT6 567 aa17.96■□□□□ 0.47
PRPF19-201ENST00000227524 CASC4Q6P4E1 433 aa17.96■□□□□ 0.47
PRPF19-201ENST00000227524 ATP2A3Q93084 1043 aa17.96■□□□□ 0.47
PRPF19-201ENST00000227524 SHCBP1LQ9BZQ2 653 aa17.96■□□□□ 0.47
PRPF19-201ENST00000227524 DHX35Q9H5Z1 703 aaKnown RBP17.96■□□□□ 0.47
PRPF19-201ENST00000227524 DMAP1Q9NPF5 467 aaPredicted RBP17.96■□□□□ 0.47
PRPF19-201ENST00000227524 NMRK2Q9NPI5 230 aa17.96■□□□□ 0.47
PRPF19-201ENST00000227524 ASB14A6NK59 587 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 F5H423 210 aaPredicted RBP17.96■□□□□ 0.46
PRPF19-201ENST00000227524 ZNF195O14628 629 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 TOMM70O94826 608 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 UQCRBP14927 111 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 ZFXP17010 805 aaPredicted RBP17.96■□□□□ 0.46
PRPF19-201ENST00000227524 DESP17661 470 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 ITGAXP20702 1163 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 GRK2P25098 689 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 PEX2P28328 305 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 NR2C2P49116 596 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 AQP4P55087 323 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 XIAPP98170 497 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 DYNC1I2Q13409 638 aaKnown RBP17.96■□□□□ 0.46
PRPF19-201ENST00000227524 TMEM132DQ14C87 1099 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 DPYSL2Q16555 572 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 PPP1R26Q5T8A7 1209 aaPredicted RBP17.96■□□□□ 0.46
PRPF19-201ENST00000227524 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 PLPPR4Q7Z2D5 763 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 GDPD5Q8WTR4 605 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 CDKL2Q92772 493 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 CCDC124Q96CT7 223 aaKnown RBP17.96■□□□□ 0.46
PRPF19-201ENST00000227524 SPATA33Q96N06 139 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 OLFM3Q96PB7 478 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 GORASP1Q9BQQ3 440 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 KATNBL1Q9H079 304 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 ASB7Q9H672 318 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 CYP4F11Q9HBI6 524 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 HESX1Q9UBX0 185 aa17.96■□□□□ 0.46
PRPF19-201ENST00000227524 MCF2P10911 925 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 MLNP12872 115 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 VAV1P15498 845 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 TNFAIP2Q03169 654 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 MED21Q13503 144 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 STILQ15468 1287 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 SLC10A6Q3KNW5 377 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 GJC2Q5T442 439 aaPredicted RBP17.95■□□□□ 0.46
PRPF19-201ENST00000227524 EFCAB12Q6NXP0 572 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 TTC30AQ86WT1 665 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 SCUBE3Q8IX30 993 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 CMTM5Q96DZ9 223 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 SLC4A5Q9BY07 1137 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 MAGEB5Q9BZ81 275 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 PRMT7Q9NVM4 692 aaPredicted RBP17.95■□□□□ 0.46
PRPF19-201ENST00000227524 NR2E3Q9Y5X4 410 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 PSAT1Q9Y617 370 aa17.95■□□□□ 0.46
PRPF19-201ENST00000227524 A6NJR5 290 aa17.94■□□□□ 0.46
PRPF19-201ENST00000227524 NOP56O00567 594 aaKnown RBP17.94■□□□□ 0.46
PRPF19-201ENST00000227524 PAPSS1O43252 624 aaPredicted RBP17.94■□□□□ 0.46
PRPF19-201ENST00000227524 ITGA2BP08514 1039 aa17.94■□□□□ 0.46
PRPF19-201ENST00000227524 ABCE1P61221 599 aaKnown RBP17.94■□□□□ 0.46
PRPF19-201ENST00000227524 DEUP1Q05D60 604 aa17.94■□□□□ 0.46
PRPF19-201ENST00000227524 NAB1Q13506 487 aa17.94■□□□□ 0.46
PRPF19-201ENST00000227524 CUL3Q13618 768 aa17.94■□□□□ 0.46
PRPF19-201ENST00000227524 TTLL4Q14679 1199 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms