RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 FAM117BQ6P1L5 589 aa15.34■□□□□ 0.05
CCDC47-201ENST00000225726 ARHGEF18Q6ZSZ5 1173 aa15.34■□□□□ 0.05
CCDC47-201ENST00000225726 PDIK1LQ8N165 341 aa15.34■□□□□ 0.05
CCDC47-201ENST00000225726 VPS52Q8N1B4 723 aa15.34■□□□□ 0.05
CCDC47-201ENST00000225726 SPATA13Q96N96 652 aa15.34■□□□□ 0.05
CCDC47-201ENST00000225726 CCDC77Q9BR77 488 aa15.34■□□□□ 0.05
CCDC47-201ENST00000225726 PRDM12Q9H4Q4 367 aa15.34■□□□□ 0.05
CCDC47-201ENST00000225726 NUDT5Q9UKK9 219 aa15.34■□□□□ 0.05
CCDC47-201ENST00000225726 A0A087WUV0 522 aaPredicted RBP15.33■□□□□ 0.05
CCDC47-201ENST00000225726 TLDC2A0PJX2 215 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 SLC38A8A6NNN8 435 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 RGS16O15492 202 aaPredicted RBP15.33■□□□□ 0.05
CCDC47-201ENST00000225726 IVLP07476 585 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 HOXC13P31276 330 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 NRG1Q02297 640 aaPredicted RBP15.33■□□□□ 0.05
CCDC47-201ENST00000225726 DSG1Q02413 1049 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 AP1B1Q10567 949 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 TAF10Q12962 218 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 STAT4Q14765 748 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 FASTKD3Q14CZ7 662 aaKnown RBP15.33■□□□□ 0.05
CCDC47-201ENST00000225726 TMCO2Q7Z6W1 182 aaPredicted RBP15.33■□□□□ 0.05
CCDC47-201ENST00000225726 SLC39A13Q96H72 371 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 TMEM169Q96HH4 297 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 SERPINB12Q96P63 405 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 TTLL2Q9BWV7 592 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 STMN4Q9H169 189 aaPredicted RBP15.33■□□□□ 0.05
CCDC47-201ENST00000225726 ETNK1Q9HBU6 452 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.33■□□□□ 0.05
CCDC47-201ENST00000225726 NEU3Q9UQ49 428 aa15.33■□□□□ 0.05
CCDC47-201ENST00000225726 MRPL42Q9Y6G3 142 aaKnown RBP15.33■□□□□ 0.05
CCDC47-201ENST00000225726 RPL17P18621 184 aaKnown RBP15.33■□□□□ 0.04
CCDC47-201ENST00000225726 TUFMP49411 452 aaKnown RBP15.33■□□□□ 0.04
CCDC47-201ENST00000225726 MANEALQ5VSG8 457 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 P2RY11Q96G91 374 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 SPG21Q9NZD8 308 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 HSFX1Q9UBD0 423 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 AFF4Q9UHB7 1163 aaKnown RBP15.33■□□□□ 0.04
CCDC47-201ENST00000225726 ZMYND8Q9ULU4 1186 aaPredicted RBP15.33■□□□□ 0.04
CCDC47-201ENST00000225726 AGTP01019 485 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 ATF6P18850 670 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 MX2P20592 715 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 FDFT1P37268 417 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 ANKRD20A2Q5SQ80 823 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 ANKRD20A1Q5TYW2 823 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 ANKRD20A3Q5VUR7 823 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 CCDC13Q8IYE1 715 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 CCNYQ8ND76 341 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 TBC1D31Q96DN5 1066 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 CLSTN3Q9BQT9 956 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 SIK2Q9H0K1 926 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 IL23AQ9NPF7 189 aa15.33■□□□□ 0.04
CCDC47-201ENST00000225726 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.33■□□□□ 0.04
CCDC47-201ENST00000225726 SMIM23A6NLE4 172 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 FGF10O15520 208 aaPredicted RBP15.32■□□□□ 0.04
CCDC47-201ENST00000225726 OPHN1O60890 802 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 ZDHHC11BP0C7U3 371 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 ACRP10323 421 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 TSHRP16473 764 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 TPSB2P20231 275 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 TBX4P57082 545 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 AUHQ13825 339 aaKnown RBP15.32■□□□□ 0.04
CCDC47-201ENST00000225726 TPSAB1Q15661 275 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 MSS51Q4VC12 460 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 ARFGAP2Q8N6H7 521 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 NPWQ8N729 165 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 MCUQ8NE86 351 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 GIPC2Q8TF65 315 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 FCRL2Q96LA5 508 aaPredicted RBP15.32■□□□□ 0.04
CCDC47-201ENST00000225726 RNF103O00237 685 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 METTL18O95568 372 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 GALNT2Q10471 571 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 SEMA5AQ13591 1074 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 LONRF1Q17RB8 773 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 DNAJC21Q5F1R6 531 aaKnown RBP15.32■□□□□ 0.04
CCDC47-201ENST00000225726 RASIP1Q5U651 963 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 TPGS2Q68CL5 300 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 DDX53Q86TM3 631 aaKnown RBP15.32■□□□□ 0.04
CCDC47-201ENST00000225726 PYROXD1Q8WU10 500 aa15.32■□□□□ 0.04
CCDC47-201ENST00000225726 PTPRSQ13332 1948 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 C2CD2LO14523 706 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 BANF1O75531 89 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 MAGOHP61326 146 aaKnown RBP15.31■□□□□ 0.04
CCDC47-201ENST00000225726 PPIDQ08752 370 aaKnown RBP15.31■□□□□ 0.04
CCDC47-201ENST00000225726 EFEMP1Q12805 493 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 TRIP4Q15650 581 aaPredicted RBP15.31■□□□□ 0.04
CCDC47-201ENST00000225726 BBS9Q3SYG4 887 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 FAXCQ5TGI0 409 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 ANKMY2Q8IV38 441 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 ATP11CQ8NB49 1132 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 NETO2Q8NC67 525 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 HDAC11Q96DB2 347 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 C1orf74Q96LT6 269 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 CATSPERBQ9H7T0 1116 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 KIAA1671Q9BY89 1806 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 ABLIM3O94929 683 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 SRGAP2BP0DMP2 458 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 SLCO1A2P46721 670 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 LMAN1P49257 510 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 TNFAIP8L3Q5GJ75 292 aa15.31■□□□□ 0.04
CCDC47-201ENST00000225726 RWDD4Q6NW29 188 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms