RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 FAM49BQ9NUQ9 324 aa12.75□□□□□ -0.37
NUP88-201ENST00000225696 COPG2Q9UBF2 871 aa12.75□□□□□ -0.37
NUP88-201ENST00000225696 NME7Q9Y5B8 376 aa12.75□□□□□ -0.37
NUP88-201ENST00000225696 PHIPQ8WWQ0 1821 aa12.75□□□□□ -0.37
NUP88-201ENST00000225696 GOLGA8QA0A0J9YX86 632 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 GOLGA8OA6NCC3 632 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 GOLGA8NF8WBI6 632 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 VILLO15195 856 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 PAPSS1O43252 624 aaPredicted RBP12.74□□□□□ -0.37
NUP88-201ENST00000225696 STAG3L1P0CL83 205 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 RALBP11234 206 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 VDRP11473 427 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 COX4I1P13073 169 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 TPSB2P20231 275 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 PHKA2P46019 1235 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 CCR10P46092 362 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 CHN2P52757 468 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 ATXN3P54252 364 aaPredicted RBP12.74□□□□□ -0.37
NUP88-201ENST00000225696 ABCE1P61221 599 aaKnown RBP12.74□□□□□ -0.37
NUP88-201ENST00000225696 SNAPC2Q13487 334 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 TPSAB1Q15661 275 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 DLG2Q15700 870 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 GOLGA7BQ2TAP0 167 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 ANKRD20A4Q4UJ75 823 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 PABPC1LQ4VXU2 614 aaKnown RBP12.74□□□□□ -0.37
NUP88-201ENST00000225696 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 HPDLQ96IR7 371 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 LENG8Q96PV6 779 aaPredicted RBP12.74□□□□□ -0.37
NUP88-201ENST00000225696 WRNIP1Q96S55 665 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 IFT122Q9HBG6 1241 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 TMPRSS4Q9NRS4 437 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 DTLQ9NZJ0 730 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 G3BP2Q9UN86 482 aaKnown RBP12.74□□□□□ -0.37
NUP88-201ENST00000225696 HES2Q9Y543 173 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 COMMD3-BMI1R4GMX3 469 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 GLRA3O75311 464 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 FBXO21O94952 628 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 AMHP03971 560 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 TFAP2AP05549 437 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 ATP5BP06576 529 aaKnown RBP12.74□□□□□ -0.37
NUP88-201ENST00000225696 SDC4P31431 198 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 SERPINB5P36952 375 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 OAZ1P54368 228 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 MTTPP55157 894 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 MBTD1Q05BQ5 628 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 SEMA5AQ13591 1074 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 STEAP4Q687X5 459 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 LCLAT1Q6UWP7 414 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 CATSPERGQ6ZRH7 1159 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 CCDC185Q8N715 623 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 RNF148Q8N7C7 305 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 ACVR1CQ8NER5 493 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 CPB2Q96IY4 423 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 DNAJC28Q9NX36 388 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 AK5Q9Y6K8 562 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 DNAH12Q6ZR08 3092 aa12.74□□□□□ -0.37
NUP88-201ENST00000225696 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 CASQ2O14958 399 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 DNAJA2O60884 412 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 ALOX15P16050 662 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 FDFT1P37268 417 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 RANBP1P43487 201 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 ALDH1A3P47895 512 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 HARS2P49590 506 aaKnown RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 IRF9Q00978 393 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 KLF10Q13118 480 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 PDCD2Q16342 344 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 SLC10A6Q3KNW5 377 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 OGFRL1Q5TC84 451 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 ACOT1Q86TX2 421 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 CMTM5Q96DZ9 223 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 MPP4Q96JB8 637 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 FCRL3Q96P31 734 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 KCTD15Q96SI1 283 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 ZNF670Q9BS34 389 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 CCDC28BQ9BUN5 200 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 WDR55Q9H6Y2 383 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 CAB39LQ9H9S4 337 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 RNF19AQ9NV58 838 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 HSFX1Q9UBD0 423 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 CENPFP49454 3210 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 EVPLQ92817 2033 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 IGKV6-21A0A0C4DH24 114 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 A0A1B0GTW7 788 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 AIM2O14862 343 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 LTFP02788 710 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 GOT1P17174 413 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 PMLP29590 882 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 TYK2P29597 1187 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 MXD4Q14582 209 aaPredicted RBP12.73□□□□□ -0.37
NUP88-201ENST00000225696 STXBP5Q5T5C0 1151 aa12.73□□□□□ -0.37
NUP88-201ENST00000225696 NCBP2-AS2Q69YL0 99 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms