RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 KCNMB4Q86W47 210 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 TRAPPC5Q8IUR0 188 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 LZTR1Q8N653 840 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 PPTC7Q8NI37 304 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 ZBTB10Q96DT7 871 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 VPS50Q96JG6 964 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 SAE1Q9UBE0 346 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-201ENST00000223398 ZNF7P17097 686 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-201ENST00000223398 LSP1P33241 339 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 CD151P48509 253 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 PTENP60484 403 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 PRKAA1Q13131 559 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 SPRYD7Q5W111 196 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 SERPINA13PQ6UXR4 307 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 USP6NLQ92738 828 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 CCDC126Q96EE4 140 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 CTSEP14091 401 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 NCKAP1LP55160 1127 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 FAM153AQ9UHL3 310 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 KRT87PA6NCN2 255 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 EIF3HO15372 352 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■□□□ 13.4
CLIP2-201ENST00000223398 NDUFS2O75306 463 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 RBP1P09455 135 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 FMO4P31512 558 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 SARSP49591 514 aaKnown RBP18.88■□□□□ 0.61
CLIP2-201ENST00000223398 TARBP2Q15633 366 aaKnown RBP18.88■□□□□ 0.61
CLIP2-201ENST00000223398 UNC93AQ86WB7 457 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 C3orf20Q8ND61 904 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 SKA1Q96BD8 255 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 GOLGA2P5Q9HBQ8 144 aa18.88■□□□□ 0.61
CLIP2-201ENST00000223398 MTA2O94776 668 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 SERPINA4P29622 427 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 OR1D2P34982 312 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 NOS2P35228 1153 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 OSBPL1AQ9BXW6 950 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 ZCCHC2Q9C0B9 1178 aaKnown RBP18.87■□□□□ 0.61
CLIP2-201ENST00000223398 SEPT3Q9UH03 358 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 CYP3A7-CYP3A51PA0A087WV96 503 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 ASGR1P07306 291 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 CYP3A7P24462 503 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 RBL1P28749 1068 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 XRCC4Q13426 336 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 CHMP1BQ7LBR1 199 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 C7orf61Q8IZ16 206 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 STX19Q8N4C7 294 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 C12orf29Q8N999 325 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 PCDH9Q9HC56 1237 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 EFCAB14O75071 495 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 CYP2A7P20853 494 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 SPACA7Q96KW9 195 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 MTA1Q13330 715 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 VCPIP1Q96JH7 1222 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 DNPEPQ9ULA0 475 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 PHTF1Q9UMS5 762 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 DNAJC16Q9Y2G8 782 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 SNX8Q9Y5X2 465 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 SLC9A3R1O14745 358 aaPredicted RBP18.87■□□□□ 0.61
CLIP2-201ENST00000223398 OR56A5P0C7T3 313 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 CSH1P0DML2 217 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 CSH2P0DML3 217 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 MAGEA9P43362 315 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 NPNTQ6UXI9 565 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 DET1Q7L5Y6 550 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 LENG9Q96B70 501 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 MIEF1Q9NQG6 463 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 TAS2R14Q9NYV8 317 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 CRYL1Q9Y2S2 319 aa18.87■□□□□ 0.61
CLIP2-201ENST00000223398 ASTN1O14525 1302 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 BTNL9Q6UXG8 535 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 MYOCQ99972 504 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 TBC1D4O60343 1298 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 CPA3P15088 417 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 TRPM8Q7Z2W7 1104 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 DIS3LQ8TF46 1054 aaKnown RBP18.86■□□□□ 0.61
CLIP2-201ENST00000223398 PIK3R5Q8WYR1 880 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 C2orf49Q9BVC5 232 aaPredicted RBP18.86■□□□□ 0.61
CLIP2-201ENST00000223398 POLR1EQ9GZS1 481 aaKnown RBP18.86■□□□□ 0.61
CLIP2-201ENST00000223398 ZMYM2Q9UBW7 1377 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 TREHO43280 583 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 ABCB1P08183 1280 aaPredicted RBP18.86■□□□□ 0.61
CLIP2-201ENST00000223398 ARF4P18085 180 aaPredicted RBP18.86■□□□□ 0.61
CLIP2-201ENST00000223398 MAPK1P28482 360 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 DCLRE1AQ6PJP8 1040 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 PIF1Q9H611 641 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 TRPC4Q9UBN4 977 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 POLR2LP62875 67 aaKnown RBP18.86■□□□□ 0.61
CLIP2-201ENST00000223398 AASDHQ4L235 1098 aaPredicted RBP18.86■□□□□ 0.61
CLIP2-201ENST00000223398 NAT16Q8N8M0 369 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 CNDP1Q96KN2 507 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 GPR20Q99678 358 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 TRHDEQ9UKU6 1024 aa18.86■□□□□ 0.61
CLIP2-201ENST00000223398 NR5A2O00482 541 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 MAP3K10Q02779 954 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 UBE3AQ05086 875 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 NR6A1Q15406 480 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 LRRC34Q8IZ02 419 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 LRRN4Q8WUT4 740 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 SEMA4DQ92854 862 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 TPBGLP0DKB5 382 aa18.85■□□□□ 0.61
CLIP2-201ENST00000223398 SLC2A4P14672 509 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms