RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 PAICSP22234 425 aaKnown RBP10.79□□□□□ -0.68
TRPS1-201ENST00000220888 KELP23276 732 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 COPAP53621 1224 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 NUP107P57740 925 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 FKBP1BP68106 108 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 FAM124AQ86V42 546 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 DENND6AQ8IWF6 608 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 SLC2A14Q8TDB8 520 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 CNBD2Q96M20 576 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 POP1Q99575 1024 aaKnown RBP10.79□□□□□ -0.68
TRPS1-201ENST00000220888 ZSWIM1Q9BR11 485 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRPS1-201ENST00000220888 ZNF711Q9Y462 761 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 USP15Q9Y4E8 981 aaPredicted RBP10.79□□□□□ -0.68
TRPS1-201ENST00000220888 PLA2R1Q13018 1463 aa10.79□□□□□ -0.68
TRPS1-201ENST00000220888 RGS5O15539 181 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 AVILO75366 819 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 CCT8P50990 548 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 C1DQ13901 141 aaKnown RBP10.78□□□□□ -0.68
TRPS1-201ENST00000220888 NFIL3Q16649 462 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 C2CD6Q53TS8 623 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 GPR135Q8IZ08 494 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 FBXO36Q8NEA4 188 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 UBE2E3Q969T4 207 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 RTFDC1Q9BY42 306 aaPredicted RBP10.78□□□□□ -0.68
TRPS1-201ENST00000220888 GULP1Q9UBP9 304 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 VTI1BQ9UEU0 232 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 ZNF112Q9UJU3 913 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 CACNB4O00305 520 aaPredicted RBP10.78□□□□□ -0.68
TRPS1-201ENST00000220888 NR5A2O00482 541 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 CRY1Q16526 586 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 TYW3Q6IPR3 259 aaKnown RBP10.78□□□□□ -0.68
TRPS1-201ENST00000220888 SLC30A10Q6XR72 485 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 TTC7BQ86TV6 843 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 EPHX4Q8IUS5 362 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 FBXO39Q8N4B4 442 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 SPPL2AQ8TCT8 520 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 KCNB2Q92953 911 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 COL26A1Q96A83 441 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 RNFT2Q96EX2 444 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 FAM111AQ96PZ2 611 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 RAD21L1Q9H4I0 556 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 AVENQ9NQS1 362 aaPredicted RBP10.78□□□□□ -0.68
TRPS1-201ENST00000220888 ARHGEF3Q9NR81 526 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 CNTFP26441 200 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 HPCAL1P37235 193 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 MLH1P40692 756 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 MTF1Q14872 753 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 PLPP4Q5VZY2 271 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 SEL1L3Q68CR1 1132 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 FAM45BPQ6NSW5 357 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 RBM43Q6ZSC3 357 aaKnown RBP10.78□□□□□ -0.68
TRPS1-201ENST00000220888 ATG16L2Q8NAA4 619 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 POLR1EQ9GZS1 481 aaKnown RBP10.78□□□□□ -0.68
TRPS1-201ENST00000220888 EFCAB1Q9HAE3 211 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 SLC27A6Q9Y2P4 619 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 TMEM120BA0PK00 339 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 SLCO1B7G3V0H7 640 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 FGF19O95750 216 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 THRAP10827 490 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 TALDO1P37837 337 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 IFNGR2P38484 337 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 CNTN2Q02246 1040 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 MCL1Q07820 350 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 CBWD6Q4V339 395 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 SNAP47Q5SQN1 464 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 STK40Q8N2I9 435 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 TAS1R2Q8TE23 839 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 STARD8Q92502 1023 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 ELMO1Q92556 727 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 ERP27Q96DN0 273 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 C19orf60Q96EN9 201 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 TBCBQ99426 244 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 SLITRK2Q9H156 845 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 ADAM21Q9UKJ8 722 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 TRHDEQ9UKU6 1024 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 GSAPA4D1B5 854 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 CNOT3O75175 753 aaKnown RBP10.78□□□□□ -0.68
TRPS1-201ENST00000220888 RECQL4O94761 1208 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 MMP13P45452 471 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 FMR1Q06787 632 aaKnown RBP eCLIP10.78□□□□□ -0.689e-8■■■□□ 15.4
TRPS1-201ENST00000220888 STX4Q12846 297 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 BRSK2Q8IWQ3 736 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 CPA6Q8N4T0 437 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 HIPK3Q9H422 1215 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 INTS13Q9NVM9 706 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 FAM153AQ9UHL3 310 aa10.78□□□□□ -0.68
TRPS1-201ENST00000220888 MED14O60244 1454 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 A0A0A6YYK5 440 aaPredicted RBP10.77□□□□□ -0.68
TRPS1-201ENST00000220888 LACTBL1A8MY62 500 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 SEC22BO75396 215 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 FGBP02675 491 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 LTFP02788 710 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 APODP05090 189 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 ATP6V1B2P21281 511 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 SKIV2L2P42285 1042 aaKnown RBP10.77□□□□□ -0.68
TRPS1-201ENST00000220888 SOX10P56693 466 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 BNC1Q01954 994 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 GRB10Q13322 594 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 PSMD5Q16401 504 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms