RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ARHGAP42A6NI28 874 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 CAPN14A8MX76 684 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 CENPBD1B2RD01 187 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 EDN1P05305 212 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 KRT5P13647 590 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 IFNA8P32881 189 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 ACOT2P49753 483 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 CCNIQ14094 377 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 C15orf59Q2T9L4 293 aaPredicted RBP14□□□□□ -0.17
GABPB1-201ENST00000220429 CCDC58Q4VC31 144 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 ACMSDQ8TDX5 336 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 JADE3Q92613 823 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 CD101Q93033 1021 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 NIFKQ9BYG3 293 aaKnown RBP14□□□□□ -0.17
GABPB1-201ENST00000220429 EBF1Q9UH73 591 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 PTPRJQ12913 1337 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 LRRIQ4A6NIV6 560 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 A8MU76 341 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 KRT15P19012 456 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 EDNRBP24530 442 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 KCNJ1P48048 391 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 IREB2P48200 963 aaKnown RBP14□□□□□ -0.17
GABPB1-201ENST00000220429 ARL4CP56559 192 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 XKR5Q6UX68 686 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 GPR180Q86V85 440 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 CADM3Q8N126 398 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 NATD1Q8N6N6 113 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 UBL4BQ8N7F7 174 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 PSD2Q9BQI7 771 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 IMPG2Q9BZV3 1241 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 R3HDMLQ9H3Y0 253 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 KIAA1586Q9HCI6 787 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 DDX56Q9NY93 547 aaKnown RBP14□□□□□ -0.17
GABPB1-201ENST00000220429 TAGLN3Q9UI15 199 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 CDH7Q9ULB5 785 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 MCM3APO60318 1980 aa14□□□□□ -0.17
GABPB1-201ENST00000220429 C2orf71A6NGG8 1288 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 PSMD12O00232 456 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 KPNA4O00629 521 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ZC3H11AO75152 810 aaKnown RBP eCLIP13.99□□□□□ -0.177e-7■■■■□ 23.2
GABPB1-201ENST00000220429 PIGRP01833 764 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 C4BPAP04003 597 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 TNNI1P19237 187 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 NAMPTP43490 491 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CLK3P49761 638 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 THOP1P52888 689 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 Q3C1V9 767 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ZACNQ401N2 412 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ZBTB41Q5SVQ8 909 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 TDRD10Q5VZ19 366 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 FAM117BQ6P1L5 589 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CLVS1Q8IUQ0 354 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 LSMEM1Q8N8F7 131 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 SHKBP1Q8TBC3 707 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 SLC7A3Q8WY07 619 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 SNF8Q96H20 258 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 SPATC1LQ9H0A9 340 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CCDC177Q9NQR7 707 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 VPS45Q9NRW7 570 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 C1orf112Q9NSG2 853 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 SENP1Q9P0U3 644 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 FBXO40Q9UH90 709 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CFAP99D6REC4 459 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 J3QRK9 145 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 DDHD2O94830 711 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 HLA-DRAP01903 254 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 DLDP09622 509 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ITIH2P19823 946 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 MDH1BQ5I0G3 518 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 WDR78Q5VTH9 848 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ACAD10Q6JQN1 1059 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ENOSF1Q7L5Y1 443 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 HEATR4Q86WZ0 1026 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ATP2A3Q93084 1043 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 FBXL8Q96CD0 374 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ISOC1Q96CN7 298 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 FERMT1Q9BQL6 677 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 TSSK1BQ9BXA7 367 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 A0A1B0GTW7 788 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ZSCAN5BA6NJL1 495 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ADM5C9JUS6 153 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 K7ERI5 159 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 AP3B1O00203 1094 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 PSMD11O00231 422 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ARHGAP33O14559 1287 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 RGS13O14921 159 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 XPO1O14980 1071 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CLOCKO15516 846 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 TYROBPO43914 113 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 DDNO94850 711 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 MYL2P10916 166 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 IL4RP24394 825 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 IST1P53990 364 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ITGADQ13349 1161 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 TARBP2Q15633 366 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 PKN2Q16513 984 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 MOGQ16653 247 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CLEC16AQ2KHT3 1053 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CDONQ4KMG0 1287 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms