RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KLHL2O95198 593 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 SETSIPP0DME0 302 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 LCP1P13796 627 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 CRABP2P29373 138 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 PAPOLAP51003 745 aaKnown RBP17.76■□□□□ 0.43
USB1-201ENST00000219281 SATB1Q01826 763 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 POU5F1BQ06416 359 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 SOWAHAQ2M3V2 549 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 PPM1JQ5JR12 505 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 ATP2A3Q93084 1043 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 C11orf84Q9BUA3 381 aaPredicted RBP17.76■□□□□ 0.43
USB1-201ENST00000219281 IL1RAPL1Q9NZN1 696 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 MORF4L1Q9UBU8 362 aa17.76■□□□□ 0.43
USB1-201ENST00000219281 A0A0A0MRY4 1105 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 HCRTO43612 131 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 SIN3BO75182 1162 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 FKBP6O75344 327 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 DGKIO75912 1065 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 TOMM70O94826 608 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 LYNP07948 512 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 ZCCHC18P0CG32 403 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 GMPRP36959 345 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 FDFT1P37268 417 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 ZNF484Q5JVG2 852 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 EFHC1Q5JVL4 640 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 RAPH1Q70E73 1250 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 AFG1LQ8WV93 481 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 NLRP7Q8WX94 980 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 CENPIQ92674 756 aaPredicted RBP17.75■□□□□ 0.43
USB1-201ENST00000219281 SPATA13Q96N96 652 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 NR1H4Q96RI1 486 aaPredicted RBP17.75■□□□□ 0.43
USB1-201ENST00000219281 CEP41Q9BYV8 373 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 SHCBP1LQ9BZQ2 653 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 DPEP3Q9H4B8 488 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 FAM124BQ9H5Z6 455 aaPredicted RBP17.75■□□□□ 0.43
USB1-201ENST00000219281 DCDC2Q9UHG0 476 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 E2F8A0AVK6 867 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 TSPAN1O60635 241 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 SORBS2O94875 1100 aaKnown RBP17.75■□□□□ 0.43
USB1-201ENST00000219281 SERPINE1P05121 402 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 PRKCGP05129 697 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 ITGA2BP08514 1039 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 IDH3AP50213 366 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 SNX16P57768 344 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 CDC16Q13042 620 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 KYAT1Q16773 422 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 LRRC8BQ6P9F7 803 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 ZDHHC17Q8IUH5 632 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 CCNJLQ8IV13 435 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 OR6B3Q8NGW1 331 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 PPP4R1Q8TF05 950 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 PYDC1Q8WXC3 89 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 ARNTL2Q8WYA1 636 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 SORT1Q99523 831 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 STN1Q9H668 368 aaKnown RBP17.75■□□□□ 0.43
USB1-201ENST00000219281 S100A14Q9HCY8 104 aa17.75■□□□□ 0.43
USB1-201ENST00000219281 BUD23O43709 281 aaKnown RBP17.74■□□□□ 0.43
USB1-201ENST00000219281 MLNP12872 115 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 ADORA2BP29275 332 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 ARRB2P32121 409 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 COPAP53621 1224 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 EPHB1P54762 984 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 VWA5B1Q5TIE3 1220 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 CES3Q6UWW8 571 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 IFNLR1Q8IU57 520 aaPredicted RBP17.74■□□□□ 0.43
USB1-201ENST00000219281 SH3GL3Q99963 347 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 KATNBL1Q9H079 304 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 TMEM216Q9P0N5 145 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 PDP2Q9P2J9 529 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 PDE5AO76074 875 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 PROCP04070 461 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 LGALS2P05162 132 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 PGAM1P18669 254 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 CALRP27797 417 aaKnown RBP17.74■□□□□ 0.43
USB1-201ENST00000219281 RASSF3Q86WH2 238 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 LINC01465Q8N7H1 131 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 BRI3BPQ8WY22 251 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 OLFM3Q96PB7 478 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 TRAPPC9Q96Q05 1148 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 DNAJC28Q9NX36 388 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 SYBUQ9NX95 663 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 SEPT10Q9P0V9 454 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 USP3Q9Y6I4 520 aa17.74■□□□□ 0.43
USB1-201ENST00000219281 ERVK-10P10266 1014 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 CCDC130P13994 396 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 YY1P25490 414 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 ADCYAP1R1P41586 468 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 LAMC2Q13753 1193 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 PDPK2PQ6A1A2 396 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 AAGABQ6PD74 315 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 SLC26A9Q7LBE3 791 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 NT5DC4Q86YG4 428 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 GBP5Q96PP8 586 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 TUBGCP5Q96RT8 1024 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 CYP4F11Q9HBI6 524 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 RNF19AQ9NV58 838 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 ZNF358Q9NW07 568 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 CLEC11AQ9Y240 323 aa17.73■□□□□ 0.43
USB1-201ENST00000219281 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.73■□□□□ 0.43
USB1-201ENST00000219281 CLGNO14967 610 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms