RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ZNF839A8K0R7 811 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 DHRS4L1P0CG22 281 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 CHRNB1P11230 501 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 SAT1P21673 171 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 USP43Q70EL4 1123 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 DSG4Q86SJ6 1040 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 LINC00116Q8NCU8 138 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 SLC44A1Q8WWI5 657 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 POMGNT1Q8WZA1 660 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 CITED4Q96RK1 184 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 PCDH9Q9HC56 1237 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 GPRC5CQ9NQ84 441 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 TRPV5Q9NQA5 729 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 RAB6BQ9NRW1 208 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 SEPT3Q9UH03 358 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 TRPC1P48995 793 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 TPD52P55327 224 aaPredicted RBP15.03■□□□□ -0
PTPRA-201ENST00000216877 RPL7AP62424 266 aaKnown RBP15.03■□□□□ -0
PTPRA-201ENST00000216877 KLF1Q13351 362 aaPredicted RBP15.03■□□□□ -0
PTPRA-201ENST00000216877 E2F2Q14209 437 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 LRRC8EQ6NSJ5 796 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 FAM71AQ8IYT1 594 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 ZCCHC7Q8N3Z6 543 aaKnown RBP15.03■□□□□ -0
PTPRA-201ENST00000216877 EXD1Q8NHP7 514 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 ADNPQ9H2P0 1102 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 F8VP50 259 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 MAN1A2O60476 641 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 SERPINB2P05120 415 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 APRTP07741 180 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 CLEC16AQ2KHT3 1053 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 SLC43A3Q8NBI5 491 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 OTUD5Q96G74 571 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 C1orf50Q9BV19 199 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 WDR41Q9HAD4 459 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 EXOC7Q9UPT5 735 aa15.03■□□□□ -0
PTPRA-201ENST00000216877 KRT8P05787 483 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 ADSSP30520 456 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 CTBSQ01459 385 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 IKBKEQ14164 716 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 SLC10A5Q5PT55 438 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 MFSD14BQ5SR56 506 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 TXNRD3NBQ6F5E7 133 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 TATDN1Q6P1N9 297 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 KCTD8Q6ZWB6 473 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 PCYOX1LQ8NBM8 494 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 TAS1R2Q8TE23 839 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 MOCOSQ96EN8 888 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 GJD4Q96KN9 370 aaPredicted RBP15.02■□□□□ -0
PTPRA-201ENST00000216877 MBOAT7Q96N66 472 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 OLAHQ9NV23 265 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 RIMS3Q9UJD0 308 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 GGA1Q9UJY5 639 aa15.02■□□□□ -0
PTPRA-201ENST00000216877 A0A0B4J269 797 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 TEX28O15482 410 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 FYNP06241 537 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 SPATA31C1P0DKV0 1188 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 PRKACBP22694 351 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 ALDH3B2P48448 385 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 NSUN2Q08J23 767 aaKnown RBP eCLIP15.02□□□□□ -0.01
PTPRA-201ENST00000216877 PTK2BQ14289 1009 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 RAB39AQ14964 217 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 ZNF394Q53GI3 561 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 TMTC4Q5T4D3 741 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 SPOCD1Q6ZMY3 1216 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 PIWIL3Q7Z3Z3 882 aaKnown RBP15.02□□□□□ -0.01
PTPRA-201ENST00000216877 RCOR2Q8IZ40 523 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 SEMA4DQ92854 862 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 NPAS2Q99743 824 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 CDH19Q9H159 772 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 MRPL47Q9HD33 250 aaKnown RBP15.02□□□□□ -0.01
PTPRA-201ENST00000216877 WDR6Q9NNW5 1121 aaKnown RBP15.02□□□□□ -0.01
PTPRA-201ENST00000216877 TNFRSF10AO00220 468 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 MTA2O94776 668 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 IFNA8P32881 189 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 CLCQ05315 142 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 SMU1Q2TAY7 513 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 CCSAPQ6IQ19 270 aaPredicted RBP15.02□□□□□ -0.01
PTPRA-201ENST00000216877 ANKRD26P1Q6NSI1 321 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 ZNF720Q7Z2F6 126 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 MCEEQ96PE7 176 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 DGCR6LQ9BY27 220 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 CCDC90BQ9GZT6 254 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 SORCS3Q9UPU3 1222 aa15.02□□□□□ -0.01
PTPRA-201ENST00000216877 ZBTB14O43829 449 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 RFX1P22670 979 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 PHC1P78364 1004 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 TJAP1Q5JTD0 557 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 LYSMD3Q7Z3D4 306 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 CBWD2Q8IUF1 395 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 UNC45BQ8IWX7 931 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 XXYLT1Q8NBI6 393 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 EFHD1Q9BUP0 239 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 PIH1D1Q9NWS0 290 aaKnown RBP15.01□□□□□ -0.01
PTPRA-201ENST00000216877 DNAJC28Q9NX36 388 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 MAGED2Q9UNF1 606 aaPredicted RBP15.01□□□□□ -0.01
PTPRA-201ENST00000216877 LTBP1Q14766 1721 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 PNMA6FA0A0J9YX94 578 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 PCP4L1A6NKN8 68 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 CLOCKO15516 846 aa15.01□□□□□ -0.01
PTPRA-201ENST00000216877 GAS7O60861 476 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms