RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 C2orf15Q8WU43 125 aaKnown RBP17.92■□□□□ 0.46
VRK1-201ENST00000216639 DYDC1Q8WWB3 177 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 CCT8L2Q96SF2 557 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 RABEP2Q9H5N1 569 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 NKIRAS1Q9NYS0 192 aa17.92■□□□□ 0.46
VRK1-201ENST00000216639 EBAG9O00559 213 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 AVILO75366 819 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 CPP00450 1065 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 SLC2A3P11169 496 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 MLNP12872 115 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 SEC24CP53992 1094 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 COG7P83436 770 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 MTM1Q13496 603 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 TCTN1Q2MV58 587 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 CAND1Q86VP6 1230 aaKnown RBP17.91■□□□□ 0.46
VRK1-201ENST00000216639 ATXN2LQ8WWM7 1075 aaKnown RBP17.91■□□□□ 0.46
VRK1-201ENST00000216639 CASP10Q92851 521 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 HDAC11Q96DB2 347 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 TTPALQ9BTX7 342 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 CATSPERBQ9H7T0 1116 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 COMMD8Q9NX08 183 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 ZC3H7BQ9UGR2 993 aaKnown RBP17.91■□□□□ 0.46
VRK1-201ENST00000216639 SFMBT1Q9UHJ3 866 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 IKBKGQ9Y6K9 419 aa17.91■□□□□ 0.46
VRK1-201ENST00000216639 FGF10O15520 208 aaPredicted RBP17.9■□□□□ 0.46
VRK1-201ENST00000216639 AMHP03971 560 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 YWHAQP27348 245 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 CCT5P48643 541 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 PSEN1P49768 467 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 TLE2Q04725 743 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 GALNT2Q10471 571 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 IKBKEQ14164 716 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 MSANTD2Q6P1R3 559 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 DEFB128Q7Z7B8 93 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 TRABD2AQ86V40 505 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 ATAD1Q8NBU5 361 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 ZNF473Q8WTR7 871 aaKnown RBP17.9■□□□□ 0.46
VRK1-201ENST00000216639 SMC6Q96SB8 1091 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 PAFAH2Q99487 392 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 VAT1Q99536 393 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 SIK2Q9H0K1 926 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 CCDC134Q9H6E4 229 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 NMUR1Q9HB89 426 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 KLHL8Q9P2G9 620 aaPredicted RBP17.9■□□□□ 0.46
VRK1-201ENST00000216639 IGSF9Q9P2J2 1179 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 TTC3P53804 2025 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 HTTP42858 3142 aa17.9■□□□□ 0.46
VRK1-201ENST00000216639 TRDMT1O14717 391 aaKnown RBP17.89■□□□□ 0.46
VRK1-201ENST00000216639 PAGE1O75459 146 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 SRGAP2BP0DMP2 458 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 GBP2P32456 591 aaPredicted RBP17.89■□□□□ 0.46
VRK1-201ENST00000216639 MAGEA3P43357 314 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 ALDH7A1P49419 539 aaKnown RBP17.89■□□□□ 0.46
VRK1-201ENST00000216639 GPR15P49685 360 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 ZNF33AQ06730 810 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 WASHC5Q12768 1159 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 MGAT5BQ3V5L5 792 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 TRIM60Q495X7 471 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 C1orf53Q5VUE5 145 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 SDHAF4Q5VUM1 108 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 RWDD4Q6NW29 188 aaKnown RBP17.89■□□□□ 0.46
VRK1-201ENST00000216639 ADGRD1Q6QNK2 874 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 PID1Q7Z2X4 250 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 IGDCC3Q8IVU1 814 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 ZNF567Q8N184 647 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 LZTR1Q8N653 840 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 TBC1D31Q96DN5 1066 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 CHMP6Q96FZ7 201 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 CFAP36Q96G28 342 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 B3GALT6Q96L58 329 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 DHRS4Q9BTZ2 278 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 OLA1Q9NTK5 396 aaKnown RBP17.89■□□□□ 0.46
VRK1-201ENST00000216639 IL37Q9NZH6 218 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 RSPH14Q9UHP6 348 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 TRHDEQ9UKU6 1024 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 TLR6Q9Y2C9 796 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 SNX10Q9Y5X0 201 aa17.89■□□□□ 0.46
VRK1-201ENST00000216639 MYO16Q9Y6X6 1858 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 TCRBV9S1A1TA0A576 114 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 MTMR11A4FU01 709 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 NT5C1B-RDH14C9J2C7 533 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 GARSP41250 739 aaKnown RBP17.89■□□□□ 0.45
VRK1-201ENST00000216639 RPL10AP62906 217 aaKnown RBP17.89■□□□□ 0.45
VRK1-201ENST00000216639 ITPRIPL1Q6GPH6 555 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 CNKSR3Q6P9H4 555 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 NPWQ8N729 165 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 FBXO32Q969P5 355 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 MRRFQ96E11 262 aaKnown RBP17.89■□□□□ 0.45
VRK1-201ENST00000216639 SPATA17Q96L03 361 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 SEPT5Q99719 369 aaPredicted RBP17.89■□□□□ 0.45
VRK1-201ENST00000216639 PRMT1Q99873 361 aaKnown RBP17.89■□□□□ 0.45
VRK1-201ENST00000216639 FAM107BQ9H098 131 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 TRABDQ9H4I3 376 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 TLR8Q9NR97 1041 aaKnown RBP17.89■□□□□ 0.45
VRK1-201ENST00000216639 CLIC5Q9NZA1 410 aa17.89■□□□□ 0.45
VRK1-201ENST00000216639 SMG5Q9UPR3 1016 aaKnown RBP17.89■□□□□ 0.45
VRK1-201ENST00000216639 VWA8A3KMH1 1905 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 FAM92AA1XBS5 289 aa17.88■□□□□ 0.45
VRK1-201ENST00000216639 MSI1O43347 362 aaKnown RBP17.88■□□□□ 0.45
VRK1-201ENST00000216639 TBC1D4O60343 1298 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms