RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 FAM72BQ86X60 149 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 DENND1CQ8IV53 801 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 SPATA4Q8NEY3 305 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 AZIN2Q96A70 460 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 TBC1D31Q96DN5 1066 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
POLR2E-201ENST00000215587 LRFN3Q9BTN0 628 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 AP1M1Q9BXS5 423 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 ADAM7Q9H2U9 754 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 XPO7Q9UIA9 1087 aaKnown RBP17.13■□□□□ 0.33
POLR2E-201ENST00000215587 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 SNX10Q9Y5X0 201 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 ANAPC1Q9H1A4 1944 aa17.13■□□□□ 0.33
POLR2E-201ENST00000215587 REV3LO60673 3130 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 TCRBV7S2A1N4TA0A589 114 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 CCDC188H7C350 402 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 TBX10O75333 385 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 LRIG2O94898 1065 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 IL4RP24394 825 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 GGCXP38435 758 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 KLF1Q13351 362 aaPredicted RBP17.12■□□□□ 0.33
POLR2E-201ENST00000215587 DPYSQ14117 519 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 CTC1Q2NKJ3 1217 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 ATAT1Q5SQI0 421 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 RAP1GAP2Q684P5 730 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 RWDD4Q6NW29 188 aaKnown RBP17.12■□□□□ 0.33
POLR2E-201ENST00000215587 TTC13Q8NBP0 860 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 TTC16Q8NEE8 873 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 PCDH19Q8TAB3 1148 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 ITFG1Q8TB96 612 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 PABPC5Q96DU9 382 aaKnown RBP17.12■□□□□ 0.33
POLR2E-201ENST00000215587 RIPOR3Q96MK2 946 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 HERPUD2Q9BSE4 406 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 ARHGEF4Q9NR80 690 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 HOMER3Q9NSC5 361 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 CLEC1BQ9P126 229 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 ZNF510Q9Y2H8 683 aa17.12■□□□□ 0.33
POLR2E-201ENST00000215587 E9PAM4 449 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 F5H5T6 163 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 FGF10O15520 208 aaPredicted RBP17.11■□□□□ 0.33
POLR2E-201ENST00000215587 BMP1P13497 986 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 TACR2P21452 398 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 TGM2P21980 687 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 EPHB2P29323 1055 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 C2orf54Q08AI8 447 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 AUHQ13825 339 aaKnown RBP17.11■□□□□ 0.33
POLR2E-201ENST00000215587 MANEALQ5VSG8 457 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 SLC9A4Q6AI14 798 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 GET4Q7L5D6 327 aaPredicted RBP17.11■□□□□ 0.33
POLR2E-201ENST00000215587 SH3RF2Q8TEC5 729 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 CATSPERBQ9H7T0 1116 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 KIF9Q9HAQ2 790 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 RBM12Q9NTZ6 932 aaKnown RBP17.11■□□□□ 0.33
POLR2E-201ENST00000215587 TDP1Q9NUW8 608 aa17.11■□□□□ 0.33
POLR2E-201ENST00000215587 AGO1Q9UL18 857 aaKnown RBP17.11■□□□□ 0.33
POLR2E-201ENST00000215587 TRANK1O15050 2925 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 E2F8A0AVK6 867 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 APOC4-APOC2K7ER74 178 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 LEFTY2O00292 366 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 APOC2P02655 101 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 KLKB1P03952 638 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 AMPD1P23109 780 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 HOXC13P31276 330 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 MTHFRP42898 656 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 ADCY2Q08462 1091 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 COL19A1Q14993 1142 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 SIX1Q15475 284 aaPredicted RBP17.1■□□□□ 0.33
POLR2E-201ENST00000215587 AAK1Q2M2I8 961 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 RABGAP1LQ5R372 815 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 ADGRF1Q5T601 910 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 NADSYN1Q6IA69 706 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 TMCO3Q6UWJ1 677 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 HTR3DQ70Z44 454 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 NPAS3Q8IXF0 933 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 LGI2Q8N0V4 545 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 PQLC3Q8N755 202 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 USP13Q92995 863 aaPredicted RBP17.1■□□□□ 0.33
POLR2E-201ENST00000215587 WBP2Q969T9 261 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 PRMT1Q99873 361 aaKnown RBP17.1■□□□□ 0.33
POLR2E-201ENST00000215587 FRMD8P1Q9BZ68 369 aaPredicted RBP17.1■□□□□ 0.33
POLR2E-201ENST00000215587 SMG9Q9H0W8 520 aaKnown RBP17.1■□□□□ 0.33
POLR2E-201ENST00000215587 S1PR5Q9H228 398 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 GDE1Q9NZC3 331 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 VANGL2Q9ULK5 521 aa17.1■□□□□ 0.33
POLR2E-201ENST00000215587 DENND4CQ5VZ89 1909 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 PHF2O75151 1096 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 PRAMEF12O95522 483 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 ERCC2P18074 760 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 WEE1P30291 646 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 SERPINB6P35237 376 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 CBX2Q14781 532 aaPredicted RBP17.09■□□□□ 0.33
POLR2E-201ENST00000215587 FAM133BQ5BKY9 247 aaKnown RBP17.09■□□□□ 0.33
POLR2E-201ENST00000215587 C1orf228Q6PIY5 440 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 Q6ZNB5 142 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 C14orf80Q86SX3 495 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 PRELID2Q8N945 189 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 ZSCAN18Q8TBC5 510 aaPredicted RBP17.09■□□□□ 0.33
POLR2E-201ENST00000215587 C1orf54Q8WWF1 131 aa17.09■□□□□ 0.33
POLR2E-201ENST00000215587 P3H4Q92791 437 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms