RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CYTH2Q99418 400 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 INTS9Q9NV88 658 aaKnown RBP14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 CLIC5Q9NZA1 410 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 PSMC3IPQ9P2W1 217 aaPredicted RBP14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 TBX21Q9UL17 535 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 NEU3Q9UQ49 428 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 CHMP2BQ9UQN3 213 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 HTTP42858 3142 aa14.74□□□□□ -0.05
RTFDC1-201ENST00000023939 MTMR11A4FU01 709 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 TRDMT1O14717 391 aaKnown RBP14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 FGF10O15520 208 aaPredicted RBP14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 SLC2A3P11169 496 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 EPHB2P29323 1055 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 RFC2P35250 354 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 PGFP49763 221 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 PSEN1P49768 467 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 AP1B1Q10567 949 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 DDR2Q16832 855 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 TRIM60Q495X7 471 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 ARTNQ5T4W7 220 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 FAXCQ5TGI0 409 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 ADGRD1Q6QNK2 874 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 AGGF1Q8N302 714 aaeCLIP14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 NPWQ8N729 165 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 ATAD1Q8NBU5 361 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 FBF1Q8TES7 1133 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 C1orf74Q96LT6 269 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 VAT1Q99536 393 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 TTPALQ9BTX7 342 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 TLR6Q9Y2C9 796 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 TET1Q8NFU7 2136 aa14.73□□□□□ -0.05
RTFDC1-201ENST00000023939 TMEM120BA0PK00 339 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 PAGE1O75459 146 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 HAPLN1P10915 354 aaPredicted RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 BRAFP15056 766 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 STX2P32856 288 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 GPR15P49685 360 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 ATN1P54259 1190 aaPredicted RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 CCL23P55773 120 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 HNRNPH2P55795 449 aaKnown RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 TMED2Q15363 201 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 RTP2Q5QGT7 225 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 CNKSR3Q6P9H4 555 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 CYS1Q717R9 158 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 RNF168Q8IYW5 571 aaPredicted RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 ZNF567Q8N184 647 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 CCDC33Q8N5R6 958 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 LZTR1Q8N653 840 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 COLGALT1Q8NBJ5 622 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 CCNYQ8ND76 341 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 DPF3Q92784 378 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 SLC39A13Q96H72 371 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 SIGLEC10Q96LC7 697 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 CCT8L2Q96SF2 557 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 SSU72Q9NP77 194 aaKnown RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 OSER1Q9NX31 292 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 FNIP2Q9P278 1114 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 HCSTQ9UBK5 93 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 TRHDEQ9UKU6 1024 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 FNDC1Q4ZHG4 1894 aaPredicted RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 TCRBV9S1A1TA0A576 114 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 RASA4BC9J798 803 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 POC1B-GALNT4F8VUJ3 575 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 NDUFAB1O14561 156 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 RASA4O43374 803 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 AVILO75366 819 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 VNN2O95498 520 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 C1QAP02745 245 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 PTPN3P26045 913 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 YWHAQP27348 245 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 GARSP41250 739 aaKnown RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 SEC24CP53992 1094 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 COG7P83436 770 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 IKBKEQ14164 716 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 SLC8B1Q6J4K2 584 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 LRRC8BQ6P9F7 803 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 CAPN12Q6ZSI9 719 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 DENND5BQ6ZUT9 1274 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 BCL7CQ8WUZ0 217 aaPredicted RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 PGLYRP2Q96PD5 576 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 TSGA13Q96PP4 275 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 EBNA1BP2Q99848 306 aaKnown RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 PPANQ9NQ55 473 aaKnown RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 OLA1Q9NTK5 396 aaKnown RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 ZC3H7BQ9UGR2 993 aaKnown RBP14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 TBK1Q9UHD2 729 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 SFMBT1Q9UHJ3 866 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 SNX10Q9Y5X0 201 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 BACE2Q9Y5Z0 518 aa14.72□□□□□ -0.05
RTFDC1-201ENST00000023939 SCN5AQ14524 2016 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 WASH4PA8MWX3 477 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 PRPF4O43172 522 aaKnown RBP eCLIP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 MYCP01106 439 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 CPB1P15086 417 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 CREB1P16220 341 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 PRKCHP24723 683 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 USP46P62068 366 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 RPL10AP62906 217 aaKnown RBP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 IFRD2Q12894 506 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 ACBD5Q5T8D3 534 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms