RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Cops7bQ8BV13 264 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Fam32aQ9CR80 112 aaKnown RBP11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Lrrc71Q9D3W5 558 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ddi1Q9DAF3 408 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 AfdnQ9QZQ1 1820 aaKnown RBP11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Gm44511A0A0N4SW10 223 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ifit3bE9PV48 403 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 AmhP27106 555 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Rad51Q08297 339 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Tekt4Q149S1 447 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ggnbp1Q6K1E7 370 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Gpbp1l1Q6NZP2 473 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Map1sQ8C052 973 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Guca1bQ8VBV8 201 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 IkbkeQ9R0T8 717 aa11.32□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Klhl18A0A0G2JGN5 579 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 FaahO08914 579 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Adra1dP97714 562 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Smndc1Q8BGT7 238 aaKnown RBP11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Fbxo30Q8BJL1 746 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 MafaQ8CF90 359 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Oas1cQ924S2 362 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Chaf1bQ9D0N7 572 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Myh2G3UW82 1942 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Prl6a1O35257 230 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ephb3P54754 993 aaKnown RBP11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ptpn5P54830 541 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Hnrnph2P70333 449 aaKnown RBP11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 TankP70347 448 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ubtfl1Q3USZ2 394 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Teddm1aQ810U2 305 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Atp6ap2Q9CYN9 350 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Dmap1Q9JI44 468 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ddx21Q9JIK5 851 aaKnown RBP11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Kcnq4Q9JK97 696 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Sall1Q9ER74 1322 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Gm7942L7N277 499 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Rbp1Q00915 135 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Mpzl3Q3V3F6 237 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Zfp280bQ505F4 534 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Adora2bQ60614 332 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Wscd1Q80XH4 572 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Exd2Q8VEG4 650 aaKnown RBP11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Pgam1Q9DBJ1 254 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 PigrO70570 771 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 NogP97466 232 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Krt72Q6IME9 520 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Phf21aQ6ZPK0 659 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Aim2Q91VJ1 354 aaKnown RBP11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Paip2bQ91W45 136 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ndfip2Q91ZP6 311 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Txndc9Q9CQ79 226 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 UgcgO88693 394 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Hsd17b7O88736 334 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Aldh3a1P47739 453 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Akr1c6P70694 323 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Anxa4P97429 319 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Fam169aQ5XG69 665 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Nfe2l1Q61985 741 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Nr6a1Q64249 495 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Gadl1Q80WP8 550 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 IntS13Q8QZV7 732 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Actr8Q8R2S9 624 aaKnown RBP11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 DolkQ8R2Y3 534 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Stx18Q8VDS8 334 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Kdelr1Q99JH8 212 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Mov10l1Q99MV5 1187 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Sytl2Q99N50 950 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ppp1r3gQ9CW07 347 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Tmem86aQ9D8N3 241 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Entpd5Q9WUZ9 427 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Znf609Q8BZ47 1413 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 B020011L13RikA0A087WQI7 412 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Gm13941A2AJ38 245 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Siah3B2RWG3 268 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Magea4F2Z493 315 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Srpk1O70551 648 aaKnown RBP11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 RalgdsQ03385 852 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Adamts2Q8C9W3 1213 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Q9CR55 154 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Poc5Q9DBS8 558 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Pld1Q9Z280 1074 aa11.31□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Camta1A2A891 1682 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Pex5O09012 639 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Emilin3P59900 758 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Tnfaip2Q61333 691 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ccdc63Q8CDV6 558 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Snrnp25Q8VIK1 123 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Chst15Q91XQ5 561 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Dgcr8Q9EQM6 773 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Topaz1E5FYH1 1653 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 C2cd2E9Q3C1 696 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Pdss1Q33DR2 409 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Als2clQ60I26 952 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Gabra5Q8BHJ7 463 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Sugp1Q8CH02 643 aaKnown RBP11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 ThegQ9JMB1 375 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Pik3c2aQ61194 1686 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 AfpP02772 605 aa11.3□□□□□ -0.6
Scn8a-203ENSMUST00000108908 Ttc9Q3V038 219 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms