RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Pcdha3Q91Y16 942 aa11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ssu72Q9CY97 194 aaKnown RBP11.6□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Olfr1145A2AVC7 325 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Olfr292F8VQ84 308 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pgk1P09411 417 aaKnown RBP11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tarbp2P97473 365 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Papss1Q60967 624 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pacs1Q8K212 961 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 HpdlQ8K248 371 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tbc1d22aQ8R5A6 516 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Acsf2Q8VCW8 615 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pcdhb18Q91Y02 792 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rmnd5bQ91YQ7 393 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tmed10Q9D1D4 219 aaKnown RBP11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gprc5dQ9JIL6 344 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Efcab12V9GXH0 673 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Bcl9Q9D219 1425 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slfn9B1ARD6 910 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ifnar2O35664 513 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Fdxacb1Q3UY23 622 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Akap14Q3V0I7 536 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 March4Q80TE3 409 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zbtb41Q811F1 908 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 OsgepQ8BWU5 335 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tp53inp2Q8CFU8 221 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slc47a1Q8K0H1 567 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rbmx2Q8R0F5 326 aaKnown RBP11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 1700129C05RikQ9CQ77 218 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tmx2Q9D710 295 aaKnown RBP11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Serpina1fQ9DCQ7 411 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mcf2A2AEU1 1111 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 TroapB7ZNG4 668 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Vps4bP46467 444 aaKnown RBP11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ttc9Q3V038 219 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ndrg1Q62433 394 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Kctd12Q6WVG3 327 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Plin5Q8BVZ1 463 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Lca5lQ8C0X0 741 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Rab36Q8CAM5 267 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Sh2d5Q8JZW5 429 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Kctd15Q8K0E1 283 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cog2Q921L5 731 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Hnrnpa0Q9CX86 305 aaKnown RBP11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Serpinb9bQ9DAV6 377 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ampd2Q9DBT5 798 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gm6657A0A1B0GRJ3 277 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pus7B7ZNL8 666 aaKnown RBP11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Vmn2r44L7N2E1 861 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pdcd1Q02242 288 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ripply1Q2WG77 201 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Osbp2Q5QNQ6 908 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Scube3Q66PY1 993 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zfp398Q8BV16 643 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Sept11Q8C1B7 431 aaKnown RBP11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mul1Q8VCM5 352 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Olfr866Q8VFI7 312 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 GldcQ91W43 1025 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 MydgfQ9CPT4 166 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dusp21Q9D9D8 189 aa11.59□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Olfm1O88998 485 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Krt1P04104 637 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 PrkacbP68181 351 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Trim24Q64127 1051 aaKnown RBP11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Trim14Q8BVW3 440 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gpc3Q8CFZ4 579 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gtse1Q8R080 741 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pcdha6Q91Y14 946 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Bco2Q99NF1 532 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Satl1Q9D5N8 744 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 1700123K08RikQ9D991 295 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 MecrQ9DCS3 373 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Piwil1Q9JMB7 862 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Trpc7Q9WVC5 862 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm13941A2AJ38 245 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Acnat1A2AKK5 416 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 CercamA3KGW5 592 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Vmn2r59E9PUT5 865 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm7694J3QNH8 270 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Efna5O08543 228 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Axin1O35625 863 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Hspa1lP16627 641 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Nr1h2Q60644 446 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ahcyl2Q68FL4 613 aaKnown RBP11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr395Q8VGR3 312 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tas1r2Q925I4 843 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pex6Q99LC9 981 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mup5P11591 180 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ptpn5P54830 541 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cfap206Q6PE87 622 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tbl3Q8C4J7 801 aaKnown RBP11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sept10Q8C650 452 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rgs10Q9CQE5 181 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sugt1Q9CX34 336 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 P2yr13Q9D8I2 337 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Bcl10Q9Z0H7 233 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cd97Q9Z0M6 818 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Top3bQ9Z321 862 aaKnown RBP11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Fibcd1A2AV25 459 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ccdc153P0C7Q1 202 aa11.58□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Il2rbP16297 539 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms