RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Rabep2Q91WG2 554 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Pcdha3Q91Y16 942 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Sun1Q9D666 913 aaKnown RBP20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tspan3Q9QY33 253 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Actl7bQ9QY83 418 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tk2Q9R088 270 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Plod1Q9R0E2 728 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ms4a14A0A087WSD2 1232 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Zfp990B1AVN5 605 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Vmn2r59E9PUT5 865 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Zc3h7aE9PWW6 970 aaKnown RBP20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Zfp715G3X9T1 886 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Gp1bbP56400 206 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Wdr5P61965 334 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Mylk3Q3UIZ8 795 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Prl3a1Q78Y73 227 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Akap7Q7TN79 314 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Stk40Q7TNL3 435 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ankrd45Q810N6 248 aa20.95■□□□□ 0.94
Trim47-201ENSMUST00000021120 Usp51B1AY15 661 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Banf1O54962 89 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Gsta3P30115 221 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 PhbP67778 272 aaKnown RBP20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Kpnb1P70168 876 aaKnown RBP20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Acvrl1Q61288 502 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Slc20a1Q61609 681 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Slc39a13Q8BZH0 361 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Lama3Q61789 3330 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ccdc13D3YV10 709 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 BhmtO35490 407 aaKnown RBP20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Rpl7aP12970 266 aaKnown RBP20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ccnb1P24860 430 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Sstr1P30873 391 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Nr2c2P49117 596 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Hsd17b2P51658 381 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Lipo3Q3UT41 399 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 HpseQ6YGZ1 535 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Vwa2Q70UZ7 791 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 DolkQ8R2Y3 534 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 TheglQ9DA15 459 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Hes6Q9JHE6 224 aa20.94■□□□□ 0.94
Trim47-201ENSMUST00000021120 Gm10720D3Z1I5 223 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Mup13L7N222 235 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Tspyl1O88852 379 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Cyp2j11Q3UNV2 504 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Dpysl3Q62188 570 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Syn2Q64332 586 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ptk6Q64434 451 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 WtipQ7TQJ8 398 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Dnajc6Q80TZ3 938 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Zmym6Q8BS54 1249 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Slfn5Q8CBA2 884 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Zbtb6Q8K088 423 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Arfip2Q8K221 341 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 UvragQ8K245 698 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Coq6Q8R1S0 476 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 DutQ8VCG1 200 aaKnown RBP20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Pofut2Q8VHI3 429 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Pcdha11Q91Y19 950 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Atad3Q925I1 591 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 MtrexQ9CZU3 1040 aaKnown RBP20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ccdc130Q9D516 385 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ttc9bQ9D6E4 239 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 HemgnQ9ERZ0 503 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Oxct2bQ9ESL0 520 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Oxct2aQ9JJN4 520 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Sf3b1Q99NB9 1304 aaKnown RBP20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Gm3371F7CQW8 167 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 DldO08749 509 aaKnown RBP20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Galnt4O08832 578 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ifnar2O35664 513 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Gabrb2P63137 512 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 GaltQ03249 379 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ripply1Q2WG77 201 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 March5Q3KNM2 278 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Upf3aQ3ULJ3 422 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Tars2Q3UQ84 723 aaKnown RBP20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 PighQ5M9N4 188 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Nuak1Q641K5 658 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 OcrlQ6NVF0 900 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Bnip1Q6QD59 228 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Camta2Q80Y50 1208 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Arhgef33Q8BW86 850 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Fam114a2Q8VE88 497 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Dpp3Q99KK7 738 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Actrt1Q9D9J3 376 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Rpl9-ps1S4R1R7 191 aa20.93■□□□□ 0.94
Trim47-201ENSMUST00000021120 Gad2P48320 585 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 InscQ3HNM7 579 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Trim24Q64127 1051 aaKnown RBP20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Acap2Q6ZQK5 770 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Olfr412Q7TRW7 312 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Suds3Q8BR65 328 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Ldlrap1Q8C142 308 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 TgdsQ8VDR7 355 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Slc25a11Q9CR62 314 aaKnown RBP20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Mrpl4Q9DCU6 294 aaKnown RBP20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 ParvaQ9EPC1 372 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Slc13a1Q9JHI4 594 aa20.92■□□□□ 0.94
Trim47-201ENSMUST00000021120 Cep350E9Q309 3095 aa20.92■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms