RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Cys1Q8R4T1 145 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ttc30a1Q99J38 664 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Psip1Q99JF8 528 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gstt4Q9D4P7 240 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Syde1Q9DBZ9 737 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Dkc1Q9ESX5 509 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Il21rQ9JHX3 529 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Cacna1cQ01815 2139 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm7086A0A1W2P766 342 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ptpn3A2ALK8 913 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm3187M0QWW3 260 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Syngr1O55100 234 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Nat1P50294 290 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Bop1P97452 732 aaKnown RBP16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Samd11Q1RNF8 542 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Slc20a1Q61609 681 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Syn2Q64332 586 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ubxn7Q6P5G6 467 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Olfr389Q7TRX7 312 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Il17reQ8BH06 637 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Nup85Q8R480 656 aaKnown RBP16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 BsndQ8VIM4 307 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 CygbQ9CX80 190 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Fam3aQ9D8T0 230 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 D830030K20RikE9PYQ5 218 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Taf4E9QAP7 1042 aaKnown RBP16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm3043K7N693 218 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm16440K7N6G6 218 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm2244L7N2A3 218 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm3278L7N2D2 218 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm8271L7N2E2 218 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Timm44O35857 452 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Olfr792Q7TRH9 311 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Iars2Q8BIJ6 1012 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ccdc184Q8BMK5 191 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Suds3Q8BR65 328 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Slc15a5Q8CBB2 566 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Atg14Q8CDJ3 492 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Fam160b1Q8CDM8 764 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Zdhhc3Q8R173 299 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tspan8Q8R3G9 235 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Prkag2Q91WG5 566 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Pcdha6Q91Y14 946 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tmem59Q9QY73 323 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Vmn2r72D3Z4N8 856 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Akap1O08715 857 aaKnown RBP16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Vti1aO89116 217 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 CfhP06909 1234 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Elk4P41158 430 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Elf3Q3UPW2 391 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Rexo4Q6PAQ4 432 aaKnown RBP16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Lsm8Q6ZWM4 96 aaKnown RBP16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 Atp11cQ9QZW0 1129 aa16.62■□□□□ 0.25
Trim28-201ENSMUST00000005705 PotegA5H0M4 473 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm17535J3KMR8 224 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 MipP51180 263 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 StamP70297 548 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Grid2ipQ0QWG9 1203 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Nlrc4Q3UP24 1024 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Zfp512bQ6PHP4 879 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Galnt5Q8C102 930 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Sik2Q8CFH6 931 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Prpsap2Q8R574 369 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Lypd3Q91YK8 363 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ing2Q9ESK4 281 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Twf2Q9Z0P5 349 aaKnown RBP16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Hcn2O88703 863 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 ZfxP17012 799 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Caprin2Q05A80 1031 aaKnown RBP16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Hexim2Q3TVI4 313 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ttc9Q3V038 219 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Kcna4Q61423 654 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 RgnQ64374 299 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Klhl14Q69ZK5 630 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Rad9bQ6WBX7 403 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Dnajc6Q80TZ3 938 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 4930503B20RikQ80ZP0 234 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Kansl2Q8BQR4 486 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Angel2Q8K1C0 544 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Twf1Q91YR1 350 aaKnown RBP16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ndufaf1Q9CWX2 328 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Pgm3Q9CYR6 542 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Dmap1Q9JI44 468 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Angptl2Q9R045 493 aa16.61■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm3173A6NAS3 172 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm3020E9Q3J7 150 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Zfp358E9Q8M1 571 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm2897K7N6T7 172 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Fndc3bQ6NWW9 1207 aaKnown RBP16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tmem198Q8BG75 360 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm3411Q8C7R2 150 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Lpin1Q91ZP3 924 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 TfebQ9R210 475 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Hsd11b2P51661 386 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Zgrf1Q0VGT4 1863 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Btg1-ps1Q3V0S2 161 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Btg1-ps2Q3V0X0 161 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tas2r125Q7M710 311 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Pnma2Q8BHK0 365 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ppm1lQ8BHN0 360 aa16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms