RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PSEN1P49768 467 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 ERVFC1P60507 584 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 GPS1Q13098 491 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 C9orf50Q5SZB4 431 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 FAM109BQ6ICB4 259 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 NPWQ8N729 165 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 CEP295NLQ96MC4 621 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 UBE2OQ9C0C9 1292 aaKnown RBP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 OSBPL2Q9H1P3 480 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 TLR6Q9Y2C9 796 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 INSL5Q9Y5Q6 135 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 LINC01553A4QN01 128 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 GRXCR1A8MXD5 290 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 DNALI1O14645 258 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 TLR5O60602 858 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 MOCS2O96007 188 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 ITIH2P19823 946 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 CTNNB1P35222 781 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 HCAR3P49019 387 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 TWF1Q12792 350 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 PAFAH1B3Q15102 231 aaKnown RBP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 C10orf120Q5SQS8 335 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 PIK3R6Q5UE93 754 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 MANEALQ5VSG8 457 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 MIB1Q86YT6 1006 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 GPR65Q8IYL9 337 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 TCEAL8Q8IYN2 117 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 RSAD2Q8WXG1 361 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 QKIQ96PU8 341 aaKnown RBP eCLIP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 HAPLN3Q96S86 360 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 C17orf80Q9BSJ5 609 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 SIK2Q9H0K1 926 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 VIPAS39Q9H9C1 493 aa18.17■□□□□ 0.5
PHGDH-232ENST00000641947 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.17■□□□□ 0.5
PHGDH-232ENST00000641947 REV3LO60673 3130 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-232ENST00000641947 BCLAF3A2AJT9 711 aaKnown RBP18.16■□□□□ 0.5
PHGDH-232ENST00000641947 TGM5O43548 720 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 PPFIA2O75334 1257 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 VAV1P15498 845 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 CA8P35219 290 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 BMPR1AP36894 532 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 NR2C2P49116 596 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 TBX4P57082 545 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 DHX9Q08211 1270 aaKnown RBP18.16■□□□□ 0.5
PHGDH-232ENST00000641947 CALCOCO2Q13137 446 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 PLD1Q13393 1074 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 HIBCHQ6NVY1 386 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-232ENST00000641947 C14orf80Q86SX3 495 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 TAB3Q8N5C8 712 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-232ENST00000641947 RTP4Q96DX8 246 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 MYRFLQ96LU7 910 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 HTATIP2Q9BUP3 242 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 MARCH2Q9P0N8 246 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 HS3ST4Q9Y661 456 aa18.16■□□□□ 0.5
PHGDH-232ENST00000641947 ZNF840PA6NDX5 716 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 HIDE1A8MVS5 230 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 AGPSO00116 658 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 PRRG1O14668 218 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 KCNN4O15554 427 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 IGLV3-27P01718 113 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 HSD17B3P37058 310 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 ALDH1A3P47895 512 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 SLC45A4Q5BKX6 768 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 RNASEH2BQ5TBB1 312 aaKnown RBP18.15■□□□□ 0.5
PHGDH-232ENST00000641947 SNX30Q5VWJ9 437 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 LGMNQ99538 433 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 EPAS1Q99814 870 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 EPB41L4BQ9H329 900 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 ANAPC5Q9UJX4 755 aa18.15■□□□□ 0.5
PHGDH-232ENST00000641947 SPDYE4A6NLX3 237 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 CXCL14O95715 111 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 HMBSP08397 361 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 CSH1P0DML2 217 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 CSH2P0DML3 217 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 SRGAP2BP0DMP2 458 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 EPHB2P29323 1055 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 HOXC13P31276 330 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 XRCC4Q13426 336 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 TRIP4Q15650 581 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-232ENST00000641947 TMC7Q7Z402 723 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 TMEM150AQ86TG1 271 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 CCHCR1Q8TD31 782 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 TRMT2BQ96GJ1 504 aaKnown RBP18.14■□□□□ 0.5
PHGDH-232ENST00000641947 KLHL5Q96PQ7 755 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 TCF25Q9BQ70 676 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 KLC2Q9H0B6 622 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 ZNF334Q9HCZ1 680 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-232ENST00000641947 OLA1Q9NTK5 396 aaKnown RBP18.14■□□□□ 0.5
PHGDH-232ENST00000641947 ATP8A1Q9Y2Q0 1164 aa18.14■□□□□ 0.5
PHGDH-232ENST00000641947 FARP1Q9Y4F1 1045 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-232ENST00000641947 SLC12A8A0AV02 714 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 H3BQF6 201 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 GAD2Q05329 585 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 ANKRD22Q5VYY1 191 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 LILRA6Q6PI73 481 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 CDKL3Q8IVW4 592 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-232ENST00000641947 ZNF683Q8IZ20 524 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 IQCKQ8N0W5 287 aa18.14■□□□□ 0.49
PHGDH-232ENST00000641947 SPPL3Q8TCT6 385 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms