RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ERICH1	Q86X53	443 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	KIAA2013	Q8IYS2	634 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	GPR161	Q8N6U8	529 aa	Known RBP	15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	MSANTD4	Q8NCY6	345 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	ZNF397	Q8NF99	534 aa	Predicted RBP	15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	UCMA	Q8WVF2	138 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	HMGB4	Q8WW32	186 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	C18orf8	Q96DM3	657 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	ACOX2	Q99424	681 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	FUCA2	Q9BTY2	467 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	FAM204A	Q9H8W3	233 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	NOCT	Q9UK39	431 aa	Known RBP	15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	DNAH14	Q0VDD8	3507 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	TCRBV21S2A2	A0A5A6	115 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	NPC1	O15118	1278 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	TIMM44	O43615	452 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	TBL1X	O60907	577 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	DAB1	O75553	588 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	EIF4EBP2	Q13542	120 aa	Predicted RBP	15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	EIF4H	Q15056	248 aa	Known RBP	15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	E2F5	Q15329	346 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	RNF43	Q68DV7	783 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	HJURP	Q8NCD3	748 aa	Predicted RBP	15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLC20A1	Q8WUM9	679 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	ZC3H10	Q96K80	434 aa	Known RBP	15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	BTN2A3P	Q96KV6	586 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	GABRG3	Q99928	467 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	DDIT4	Q9NX09	232 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	ELOVL2	Q9NXB9	296 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	CACNA2D2	Q9NY47	1150 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	BCCIP	Q9P287	314 aa	Known RBP eCLIP	15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLC12A6	Q9UHW9	1150 aa		15.6	■□□□□ 0.09
PHGDH-231	ENST00000641939	SYNJ2BP-COX16	A0A087WUM0	186 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939		A0A1W2PQF6	199 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	SYCE3	A1L190	88 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	TYW5	A2RUC4	315 aa	Known RBP	15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	DCLK1	O15075	740 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLC2A3	P11169	496 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	HLA-F	P30511	346 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	NOS2	P35228	1153 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	SCNN1A	P37088	669 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	NOMO3	P69849	1222 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	CDR2	Q01850	454 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	MS4A13	Q5J8X5	152 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	NAA35	Q5VZE5	725 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	C11orf74	Q86VG3	221 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	XYLT1	Q86Y38	959 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	PGBD3	Q8N328	593 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	ATP6V0D2	Q8N8Y2	350 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	ZNF557	Q8N988	423 aa	Predicted RBP	15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	OLIG1	Q8TAK6	271 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	WFIKKN2	Q8TEU8	576 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	CPA5	Q8WXQ8	436 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	RNF34	Q969K3	372 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	LOXL4	Q96JB6	756 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	CIPC	Q9C0C6	399 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	NUCKS1	Q9H1E3	243 aa	Known RBP	15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	ABCB8	Q9NUT2	735 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	COX16	Q9P0S2	106 aa		15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	THAP10	Q9P2Z0	257 aa	Predicted RBP	15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	XPO7	Q9UIA9	1087 aa	Known RBP	15.59	■□□□□ 0.09
PHGDH-231	ENST00000641939	PI4KA	P42356	2102 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	KCNU1	A8MYU2	1149 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	ZBTB24	O43167	697 aa	Predicted RBP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	LRP3	O75074	770 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	CHRNB2	P17787	502 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	GABRG2	P18507	467 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	ABCB4	P21439	1286 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	CCR1	P32246	355 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	MATK	P42679	507 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	RNASE9	P60153	205 aa	Known RBP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	RPS24	P62847	133 aa	Known RBP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	FMO1	Q01740	532 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	ARID5A	Q03989	594 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	IQCB1	Q15051	598 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	ELF2	Q15723	593 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	PLK5	Q496M5	336 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	FILIP1L	Q4L180	1135 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	FAM102A	Q5T9C2	384 aa	Predicted RBP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	TMEM215	Q68D42	235 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	MFN1	Q8IWA4	741 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	WFDC5	Q8TCV5	224 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	PRICKLE1	Q96MT3	831 aa	Predicted RBP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	DUSP15	Q9H1R2	295 aa	Predicted RBP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	CD248	Q9HCU0	757 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	RTN4	Q9NQC3	1192 aa	Known RBP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	RRN3	Q9NYV6	651 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	STIM2	Q9P246	746 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	GGA2	Q9UJY4	613 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	INVS	Q9Y283	1065 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	STON1	Q9Y6Q2	735 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	DCHS1	Q96JQ0	3298 aa		15.58	■□□□□ 0.08
PHGDH-231	ENST00000641939	MUC22	E2RYF6	1773 aa	Predicted RBP	15.57	■□□□□ 0.08
PHGDH-231	ENST00000641939	FAM170A	A1A519	330 aa		15.57	■□□□□ 0.08
PHGDH-231	ENST00000641939	WASH3P	C4AMC7	463 aa		15.57	■□□□□ 0.08
PHGDH-231	ENST00000641939		M0QYT0	321 aa		15.57	■□□□□ 0.08

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms